RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 MOCOSQ96EN8 888 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 RTKNQ9BST9 563 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 HTATIP2Q9BUP3 242 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 SLC2A11Q9BYW1 496 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 CPEB1Q9BZB8 566 aaKnown RBP12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 DCLRE1BQ9H816 532 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 MEAF6Q9HAF1 191 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 ZFYVE1Q9HBF4 777 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 BPIFA1Q9NP55 256 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 ACSS2Q9NR19 701 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 TDP1Q9NUW8 608 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 ZDHHC7Q9NXF8 308 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 MARK1Q9P0L2 795 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 RNF112Q9ULX5 631 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 FAM50BQ9Y247 325 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 CCL26Q9Y258 94 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 PPIL1Q9Y3C6 166 aa12.57□□□□□ -0.4
AC055717.2-201ENST00000561864 TRBV5-4A0A0C4DH59 114 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 C1orf232A0A0U1RR37 186 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 RGSL1A5PLK6 1076 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 MEI4A8MW99 385 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 TMEM233B4DJY2 109 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 SUPT3HB4E1H0 165 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 E5RI56 91 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 UBXN8O00124 270 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 ZNF197O14709 1029 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 PRMT5O14744 637 aaPredicted RBP12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 SLC9A3R1O14745 358 aaPredicted RBP12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 KLK8O60259 260 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 CLASP2O75122 1294 aaKnown RBP12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 NIPSNAP2O75323 286 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 SUPT3HO75486 399 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 ECI2O75521 394 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 RFPL2O75678 378 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 SUPT7LO94864 414 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 PABPC1P11940 636 aaKnown RBP12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 GFAPP14136 432 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 ZNF7P17097 686 aaPredicted RBP12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 EPHA3P29320 983 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 HLA-FP30511 346 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 HNF1BP35680 557 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 SPAM1P38567 509 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 KCNC1P48547 511 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 CDKN1CP49918 316 aaPredicted RBP12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 IL2P60568 153 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 IRX1P78414 480 aaPredicted RBP12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 BTKQ06187 659 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 CDKN3Q16667 212 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 MYLK3Q32MK0 819 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 GPR33Q49SQ1 333 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 PREPLQ4J6C6 727 aaPredicted RBP12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 CARD16Q5EG05 197 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 DGKKQ5KSL6 1271 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 WLSQ5T9L3 541 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 NXNQ6DKJ4 435 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 USP45Q70EL2 814 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 TMEM25Q86YD3 366 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 PLPP6Q8IY26 295 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 ULK2Q8IYT8 1036 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 RBFAQ8N0V3 343 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 FBXO39Q8N4B4 442 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 OR6K2Q8NGY2 324 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 FBXO27Q8NI29 283 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 RP9Q8TA86 221 aaKnown RBP12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 CD200R1Q8TD46 325 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 EXT2Q93063 718 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 PDLIM5Q96HC4 596 aaKnown RBP12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 FAM161BQ96MY7 647 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 ZNF641Q96N77 438 aaPredicted RBP12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 SAMD11Q96NU1 681 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 ANKRD27Q96NW4 1050 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 BBS2Q9BXC9 721 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 C1QTNF3Q9BXJ4 246 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 SHCBP1LQ9BZQ2 653 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 TNKS2Q9H2K2 1166 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 EBF2Q9HAK2 575 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 SPHK2Q9NRA0 654 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 NDE1Q9NXR1 346 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 GNPTGQ9UJJ9 305 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 MTF2Q9Y483 593 aaPredicted RBP12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 TRAF6Q9Y4K3 522 aa12.56□□□□□ -0.4
AC055717.2-201ENST00000561864 GLYATL1P3A0A0U1RQE8 302 aa12.55□□□□□ -0.4
AC055717.2-201ENST00000561864 NPEPPSL1A6NEC2 478 aa12.55□□□□□ -0.4
AC055717.2-201ENST00000561864 WASH3PC4AMC7 463 aa12.55□□□□□ -0.4
AC055717.2-201ENST00000561864 NEDD8-MDP1E9PL57 170 aa12.55□□□□□ -0.4
AC055717.2-201ENST00000561864 GAPDHSO14556 408 aaPredicted RBP12.55□□□□□ -0.4
AC055717.2-201ENST00000561864 PRAMEF1O95521 474 aa12.55□□□□□ -0.4
AC055717.2-201ENST00000561864 PRAMEF12O95522 483 aa12.55□□□□□ -0.4
AC055717.2-201ENST00000561864 POP4O95707 220 aaKnown RBP12.55□□□□□ -0.4
AC055717.2-201ENST00000561864 TSPAN12O95859 305 aa12.55□□□□□ -0.4
AC055717.2-201ENST00000561864 JUNP05412 331 aaKnown RBP12.55□□□□□ -0.4
AC055717.2-201ENST00000561864 FGF4P08620 206 aa12.55□□□□□ -0.4
AC055717.2-201ENST00000561864 RPS17P08708 135 aaKnown RBP12.55□□□□□ -0.4
AC055717.2-201ENST00000561864 MTHFD2P13995 350 aa12.55□□□□□ -0.4
AC055717.2-201ENST00000561864 EPCAMP16422 314 aa12.55□□□□□ -0.4
AC055717.2-201ENST00000561864 GM2AP17900 193 aa12.55□□□□□ -0.4
AC055717.2-201ENST00000561864 ATP4BP51164 291 aa12.55□□□□□ -0.4
AC055717.2-201ENST00000561864 CDC16Q13042 620 aa12.55□□□□□ -0.4
AC055717.2-201ENST00000561864 CUL3Q13618 768 aa12.55□□□□□ -0.4
AC055717.2-201ENST00000561864 SQLEQ14534 574 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms