RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 OR4D9Q8NGE8 314 aa11.55□□□□□ -0.56
USP3-220ENST00000561381 SLC37A2Q8TED4 501 aa11.55□□□□□ -0.56
USP3-220ENST00000561381 ART4Q93070 314 aa11.55□□□□□ -0.56
USP3-220ENST00000561381 FAF2Q96CS3 445 aa11.55□□□□□ -0.56
USP3-220ENST00000561381 TSGA13Q96PP4 275 aa11.55□□□□□ -0.56
USP3-220ENST00000561381 TAAR9Q96RI9 348 aa11.55□□□□□ -0.56
USP3-220ENST00000561381 ZNF670Q9BS34 389 aa11.55□□□□□ -0.56
USP3-220ENST00000561381 PACSIN1Q9BY11 444 aa11.55□□□□□ -0.56
USP3-220ENST00000561381 OCIAD1Q9NX40 245 aa11.55□□□□□ -0.56
USP3-220ENST00000561381 AKAP7Q9P0M2 348 aaPredicted RBP11.55□□□□□ -0.56
USP3-220ENST00000561381 ZNHIT2Q9UHR6 403 aa11.55□□□□□ -0.56
USP3-220ENST00000561381 PCDHB11Q9Y5F2 797 aa11.55□□□□□ -0.56
USP3-220ENST00000561381 B3GALT1Q9Y5Z6 326 aa11.55□□□□□ -0.56
USP3-220ENST00000561381 C1orf232A0A0U1RR37 186 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 FADS2P1A8MWK0 482 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.54□□□□□ -0.56
USP3-220ENST00000561381 STMND1H3BQB6 276 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 PROSCO94903 275 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 ASMTLO95671 621 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 ITGB2P05107 769 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 MMP2P08253 660 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 CD82P27701 267 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 SPINT3P49223 89 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 SQSTM1Q13501 440 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 TRA2AQ13595 282 aaKnown RBP eCLIP11.54□□□□□ -0.56
USP3-220ENST00000561381 TBR1Q16650 682 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 QPCTQ16769 361 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 TMEM164Q5U3C3 297 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 CHST15Q7LFX5 561 aaPredicted RBP11.54□□□□□ -0.56
USP3-220ENST00000561381 NLRP8Q86W28 1048 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 NRSN1Q8IZ57 195 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 SFRP1Q8N474 314 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 AGBL5Q8NDL9 886 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 EXD1Q8NHP7 514 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 RAPGEF5Q92565 580 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 FATE1Q969F0 183 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 NKD1Q969G9 470 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 ARHGAP9Q9BRR9 750 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 B3GNT4Q9C0J1 378 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 PCDH9Q9HC56 1237 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 DTLQ9NZJ0 730 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 IFNKQ9P0W0 207 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 CTTNBP2NLQ9P2B4 639 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 TBC1D29Q9UFV1 150 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 KCNK6Q9Y257 313 aa11.54□□□□□ -0.56
USP3-220ENST00000561381 LUC7L2Q9Y383 392 aaKnown RBP11.54□□□□□ -0.56
USP3-220ENST00000561381 EFCAB7A8K855 629 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 A8MU76 341 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 KCNK1O00180 336 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 ZW10O43264 779 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 JCHAINP01591 159 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 ACP5P13686 325 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 ITGB6P18564 788 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 CES1P23141 567 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 CASP14P31944 242 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 CSTF2P33240 577 aaKnown RBP eCLIP11.53□□□□□ -0.56
USP3-220ENST00000561381 CD86P42081 329 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 FASLGP48023 281 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 ZBTB17Q13105 803 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 NFATC2Q13469 925 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 PEX6Q13608 980 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 LRP8Q14114 963 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 CLCA4Q14CN2 919 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 PDK2Q15119 407 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 SNAP47Q5SQN1 464 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.53□□□□□ -0.56
USP3-220ENST00000561381 ZNF648Q5T619 568 aaPredicted RBP11.53□□□□□ -0.56
USP3-220ENST00000561381 HENMT1Q5T8I9 393 aaKnown RBP11.53□□□□□ -0.56
USP3-220ENST00000561381 TMEM71Q6P5X7 295 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 FAM129CQ86XR2 697 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 CCDC13Q8IYE1 715 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 CNTD1Q8N815 330 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 CCNYQ8ND76 341 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 EID2BQ96D98 161 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 HDAC11Q96DB2 347 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 LYSMD1Q96S90 227 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 SLC38A3Q99624 504 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 TRIM4Q9C037 500 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 ZMYND15Q9H091 742 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 BRD8Q9H0E9 1235 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 ARFGAP3Q9NP61 516 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 STARD5Q9NSY2 213 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 SLC39A1Q9NY26 324 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 PCDHGA3Q9Y5H0 932 aa11.53□□□□□ -0.56
USP3-220ENST00000561381 SNX2O60749 519 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 PYGLP06737 847 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 MX2P20592 715 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 KDELR1P24390 212 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 UGT1A3P35503 534 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 PPM1FP49593 454 aaPredicted RBP11.52□□□□□ -0.57
USP3-220ENST00000561381 RPL26P61254 145 aaKnown RBP11.52□□□□□ -0.57
USP3-220ENST00000561381 TPM4P67936 248 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 GPLD1P80108 840 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 HHEXQ03014 270 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 GALNT3Q14435 633 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 ZFYVE27Q5T4F4 411 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 ANKS6Q68DC2 871 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 IYDQ6PHW0 289 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 B4GALNT4Q76KP1 1039 aa11.52□□□□□ -0.57
USP3-220ENST00000561381 LYSMD3Q7Z3D4 306 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms