RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 MYLPFQ96A32 169 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 PDLIM2Q96JY6 352 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 C8orf48Q96LL4 319 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 C5orf34Q96MH7 638 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 RNF26Q9BY78 433 aaPredicted RBP3.87□□□□□ -1.79
HERC1-211ENST00000560983 RSPH9Q9H1X1 276 aaPredicted RBP3.87□□□□□ -1.79
HERC1-211ENST00000560983 IL37Q9NZH6 218 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 PISDQ9UG56 409 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 PHTF1Q9UMS5 762 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 NCKAP1Q9Y2A7 1128 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 CA5BQ9Y2D0 317 aa3.87□□□□□ -1.79
HERC1-211ENST00000560983 COL27A1Q8IZC6 1860 aaPredicted RBP3.86□□□□□ -1.79
HERC1-211ENST00000560983 CCDC196A0A1B0GTZ2 297 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 A0A1W2PQM1 296 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 HEATR9A2RTY3 570 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 NEMP2A6NFY4 417 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 LRRC72A6NJI9 287 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 F8VP50 259 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 MID1O15344 667 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 SLC16A4O15374 487 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 DUX1O43812 170 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 MAGEC1O60732 1142 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 SORBS2O94875 1100 aaKnown RBP3.86□□□□□ -1.79
HERC1-211ENST00000560983 BAG4O95429 457 aaKnown RBP3.86□□□□□ -1.79
HERC1-211ENST00000560983 ALPPL2P10696 532 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 YWHAQP27348 245 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 CD82P27701 267 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 OAS2P29728 719 aaKnown RBP3.86□□□□□ -1.79
HERC1-211ENST00000560983 CCKBRP32239 447 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 LEPRP48357 1165 aaKnown RBP3.86□□□□□ -1.79
HERC1-211ENST00000560983 TUBP50607 506 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 ADPRHP54922 357 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 MXRA7P84157 204 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 ZFP36L1Q07352 338 aaKnown RBP3.86□□□□□ -1.79
HERC1-211ENST00000560983 STAT4Q14765 748 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 INPP5JQ15735 1006 aaPredicted RBP3.86□□□□□ -1.79
HERC1-211ENST00000560983 DEFB109BQ30KR1 87 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 POM121L1PQ3SYA9 428 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 TTC31Q49AM3 519 aaPredicted RBP3.86□□□□□ -1.79
HERC1-211ENST00000560983 NADK2Q4G0N4 442 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 PRR30Q53SZ7 412 aaPredicted RBP3.86□□□□□ -1.79
HERC1-211ENST00000560983 ZNF542PQ5EBM4 170 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 AFMIDQ63HM1 303 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 NUGGCQ68CJ6 796 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 ZNF776Q68DI1 518 aaPredicted RBP3.86□□□□□ -1.79
HERC1-211ENST00000560983 Q6ZNX1 250 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 PIK3AP1Q6ZUJ8 805 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 SEM1Q6ZVN7 128 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 ANKS1BQ7Z6G8 1248 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 DSG4Q86SJ6 1040 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 ADIPOR2Q86V24 386 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 CD302Q8IX05 232 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 SLC22A18ASQ8N1D0 253 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 NUP93Q8N1F7 819 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 TMEM86AQ8N2M4 240 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 AADATQ8N5Z0 425 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 TMEM161BQ8NDZ6 487 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 OR6B3Q8NGW1 331 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 SCAMP5Q8TAC9 235 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 GANCQ8TET4 914 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 CASKIN2Q8WXE0 1202 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 OVCA2Q8WZ82 227 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 GOLGA1Q92805 767 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 NACC2Q96BF6 587 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 PCED1BQ96HM7 432 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 SLC45A3Q96JT2 553 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 Q96MF0 132 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 SLITRK1Q96PX8 696 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 CCDC3Q9BQI4 270 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 SLC26A6Q9BXS9 759 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 ALOXE3Q9BYJ1 711 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 CIPCQ9C0C6 399 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 B3GNT4Q9C0J1 378 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 CDH19Q9H159 772 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 EPB41L5Q9HCM4 733 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 TUFT1Q9NNX1 390 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 KMT5AQ9NQR1 393 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 DPP3Q9NY33 737 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 EHD2Q9NZN4 543 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 KCNE5Q9UJ90 142 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 KCND3Q9UK17 655 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 CPSF3Q9UKF6 684 aaKnown RBP3.86□□□□□ -1.79
HERC1-211ENST00000560983 FZD4Q9ULV1 537 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 SCML1Q9UN30 329 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 SIK3Q9Y2K2 1263 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 FRMD4BQ9Y2L6 1034 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 DERAQ9Y315 318 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 C2CD2Q9Y426 696 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 LOXL2Q9Y4K0 774 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 NME7Q9Y5B8 376 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 NUMA1Q14980 2115 aa3.86□□□□□ -1.79
HERC1-211ENST00000560983 FAM92AA1XBS5 289 aa3.85□□□□□ -1.79
HERC1-211ENST00000560983 ARHGEF35A5YM69 484 aa3.85□□□□□ -1.79
HERC1-211ENST00000560983 PRAMEF26H0Y7S4 382 aa3.85□□□□□ -1.79
HERC1-211ENST00000560983 STMND1H3BQB6 276 aa3.85□□□□□ -1.79
HERC1-211ENST00000560983 TMX2-CTNND1H3BSU7 103 aa3.85□□□□□ -1.79
HERC1-211ENST00000560983 MGST3O14880 152 aa3.85□□□□□ -1.79
HERC1-211ENST00000560983 AKR1B10O60218 316 aa3.85□□□□□ -1.79
HERC1-211ENST00000560983 RBMXL2O75526 392 aaKnown RBP3.85□□□□□ -1.79
HERC1-211ENST00000560983 RNASEH2AO75792 299 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms