RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 ATXN2Q99700 1313 aaKnown RBP5.55□□□□□ -1.52
MARK3-220ENST00000560417 LOC102723996A0A087X1L8 192 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 A0A0U1RQJ8 604 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 LNP1A1A4G5 178 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 LRRC72A6NJI9 287 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 H3BNX3 289 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 EGFP01133 1207 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 MSH2P43246 934 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 STAT2P52630 851 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 CSNK2A1P68400 391 aaPredicted RBP5.55□□□□□ -1.52
MARK3-220ENST00000560417 BNC1Q01954 994 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 CALD1Q05682 793 aaKnown RBP5.55□□□□□ -1.52
MARK3-220ENST00000560417 TNFAIP1Q13829 316 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 KCNC3Q14003 757 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 AMZ1Q400G9 498 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 PAPPA-AS1Q5QFB9 102 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 KCTD18Q6PI47 426 aaPredicted RBP5.55□□□□□ -1.52
MARK3-220ENST00000560417 SLC36A4Q6YBV0 504 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 DNAAF5Q86Y56 855 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 ARID3BQ8IVW6 561 aaPredicted RBP5.55□□□□□ -1.52
MARK3-220ENST00000560417 CSNK2A3Q8NEV1 391 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 OR1J2Q8NGS2 313 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 ASB5Q8WWX0 329 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 TXNDC15Q96J42 360 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 DACH2Q96NX9 599 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 GCNAQ96QF7 691 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 TRMT1Q9NXH9 659 aaKnown RBP5.55□□□□□ -1.52
MARK3-220ENST00000560417 ARHGEF38Q9NXL2 777 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 PSD3Q9NYI0 1048 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 NFKBIL1Q9UBC1 381 aaPredicted RBP5.55□□□□□ -1.52
MARK3-220ENST00000560417 TAF1P21675 1872 aa5.55□□□□□ -1.52
MARK3-220ENST00000560417 EVPLQ92817 2033 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 UBE2CO00762 179 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 SOCS6O14544 535 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 GAGE7O76087 117 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 GAGE12FP0CL80 117 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 GAGE12GP0CL81 117 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 GAGE12IP0CL82 117 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 PRLRP16471 622 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 C21orf33P30042 268 aaPredicted RBP5.54□□□□□ -1.52
MARK3-220ENST00000560417 BDKRB2P30411 391 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 GRSF1Q12849 480 aaKnown RBP eCLIP5.54□□□□□ -1.52
MARK3-220ENST00000560417 GAGE1Q13065 139 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 GAGE4Q13068 117 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 TRAF3Q13114 568 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 GRAPQ13588 217 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 DLG2Q15700 870 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 EFHC1Q5JVL4 640 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 DCST1Q5T197 706 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 DUS1LQ6P1R4 473 aaKnown RBP5.54□□□□□ -1.52
MARK3-220ENST00000560417 MINDY1Q8N5J2 469 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 PCDH20Q8N6Y1 951 aaKnown RBP5.54□□□□□ -1.52
MARK3-220ENST00000560417 SYT2Q8N9I0 419 aaPredicted RBP5.54□□□□□ -1.52
MARK3-220ENST00000560417 OR2AK2Q8NG84 335 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 HM13Q8TCT9 377 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 PTPMT1Q8WUK0 201 aaPredicted RBP5.54□□□□□ -1.52
MARK3-220ENST00000560417 TAAR8Q969N4 342 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 VOPP1Q96AW1 172 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 MOAP1Q96BY2 351 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 KXD1Q9BQD3 176 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 SIL1Q9H173 461 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 HIF1ANQ9NWT6 349 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 STK39Q9UEW8 545 aa5.54□□□□□ -1.52
MARK3-220ENST00000560417 TMEM184BQ9Y519 407 aaPredicted RBP5.54□□□□□ -1.52
MARK3-220ENST00000560417 LOC100509620A0A075B734 347 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 TMEM8BA6NDV4 472 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 GOLGA6L9A6NEM1 432 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 TCERG1O14776 1098 aaKnown RBP5.53□□□□□ -1.52
MARK3-220ENST00000560417 SPINT2O43291 252 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 AVILO75366 819 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 HOXC6P09630 235 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 UGT1A1P22309 533 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 RRM1P23921 792 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 SEC61BP60468 96 aaKnown RBP5.53□□□□□ -1.52
MARK3-220ENST00000560417 FOXM1Q08050 763 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 DSC1Q08554 894 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 CDC16Q13042 620 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 RASA2Q15283 850 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 DAB2IPQ5VWQ8 1189 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 DENND5BQ6ZUT9 1274 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 ATG9AQ7Z3C6 839 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 TMTC2Q8N394 836 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 AVL9Q8NBF6 648 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 KCTD6Q8NC69 237 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 CCDC191Q8NCU4 936 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 OR14A16Q8NHC5 309 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 ZNF622Q969S3 477 aaKnown RBP eCLIP5.53□□□□□ -1.525e-12■□□□□ 10.7
MARK3-220ENST00000560417 ORAI1Q96D31 301 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 TMCO6Q96DC7 493 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 NUDCD1Q96RS6 583 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 KLHL4Q9C0H6 718 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 TMEM39BQ9GZU3 492 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 DENND2DQ9H6A0 471 aaPredicted RBP5.53□□□□□ -1.52
MARK3-220ENST00000560417 PCDH9Q9HC56 1237 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 NOX4Q9NPH5 578 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.53□□□□□ -1.52
MARK3-220ENST00000560417 CACNA1IQ9P0X4 2223 aa5.53□□□□□ -1.52
MARK3-220ENST00000560417 IGLV5-52A0A0A0MRZ9 124 aa5.52□□□□□ -1.53
MARK3-220ENST00000560417 hDV102S1A0JD36 115 aa5.52□□□□□ -1.53
MARK3-220ENST00000560417 FAM90A26D6RGX4 464 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms