RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 PCDHGC4Q9Y5F7 938 aa13.53□□□□□ -0.24
SMAD3-214ENST00000560402 RHPN2P1A8MT19 583 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 B8ZZF3 427 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 MYO1FO00160 1098 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 HGSO14964 777 aaPredicted RBP13.52□□□□□ -0.25
SMAD3-214ENST00000560402 PGLSO95336 258 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 RARAP10276 462 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 HGFP14210 728 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 ZNF30P17039 623 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 LHCGRP22888 699 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 AMPD1P23109 780 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 ETV3P41162 512 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 GPR3P46089 330 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 B4GALNT1Q00973 533 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 TRAF2Q12933 501 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 LY6DQ14210 128 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 TMEM164Q5U3C3 297 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 KIAA1614Q5VZ46 1190 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 PIM3Q86V86 326 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 TP53INP2Q8IXH6 220 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 CBARPQ8N350 705 aaPredicted RBP13.52□□□□□ -0.25
SMAD3-214ENST00000560402 PGBD5Q8N414 524 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 CCL4L1Q8NHW4 92 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 ZDHHC1Q8WTX9 485 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 MAIP1Q8WWC4 291 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 SGF29Q96ES7 293 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 RUNDC3BQ96NL0 473 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 DPYSL5Q9BPU6 564 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 SEMA4CQ9C0C4 833 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 POLR1EQ9GZS1 481 aaKnown RBP13.52□□□□□ -0.25
SMAD3-214ENST00000560402 NOD2Q9HC29 1040 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 ETNK2Q9NVF9 386 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 TAAR2Q9P1P5 351 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 IP6K2Q9UHH9 426 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 ANAPC7Q9UJX3 599 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 TTC7AQ9ULT0 858 aaPredicted RBP13.52□□□□□ -0.25
SMAD3-214ENST00000560402 PACSIN2Q9UNF0 486 aaPredicted RBP13.52□□□□□ -0.25
SMAD3-214ENST00000560402 SLC17A4Q9Y2C5 497 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 ALG6Q9Y672 507 aa13.52□□□□□ -0.25
SMAD3-214ENST00000560402 NPIPB15A6NHN6 443 aaPredicted RBP13.51□□□□□ -0.25
SMAD3-214ENST00000560402 A8MX80 341 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.51□□□□□ -0.25
SMAD3-214ENST00000560402 ITGB2P05107 769 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 CEACAM5P06731 702 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 ITIH1P19827 911 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 CA4P22748 312 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 CTNNA2P26232 953 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 GNPDA1P46926 289 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 MAZP56270 477 aaKnown RBP13.51□□□□□ -0.25
SMAD3-214ENST00000560402 SLC25A11Q02978 314 aaKnown RBP13.51□□□□□ -0.25
SMAD3-214ENST00000560402 BIRC2Q13490 618 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 TRA2AQ13595 282 aaKnown RBP eCLIP13.51□□□□□ -0.25
SMAD3-214ENST00000560402 PHF19Q5T6S3 580 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 ALG1LQ6GMV1 187 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 TIGD7Q6NT04 549 aaPredicted RBP13.51□□□□□ -0.25
SMAD3-214ENST00000560402 ADAMTSL4Q6UY14 1074 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 ZNF765Q7L2R6 523 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 NRROSQ86YC3 692 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 IFT20Q8IY31 132 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 RAVER1Q8IY67 606 aaKnown RBP13.51□□□□□ -0.25
SMAD3-214ENST00000560402 RASGEF1CQ8N431 466 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 TEX26Q8N6G2 289 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 OR2M4Q96R27 311 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 AMACRQ9UHK6 382 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 SUFUQ9UMX1 484 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 PCDHB11Q9Y5F2 797 aa13.51□□□□□ -0.25
SMAD3-214ENST00000560402 TENM4Q6N022 2769 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 SETXQ7Z333 2677 aaKnown RBP13.5□□□□□ -0.25
SMAD3-214ENST00000560402 PRAMEF33A0A0G2JMD5 474 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 GOLGA6CA6NDK9 693 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 GOLGA6BA6NDN3 693 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 PRAMEF10O60809 474 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 FGF1P05230 155 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 GOLGA6DP0CG33 693 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 COMTP21964 271 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 CES1P23141 567 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 MAN1A1P33908 653 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 CTNNA1P35221 906 aaKnown RBP13.5□□□□□ -0.25
SMAD3-214ENST00000560402 GPR1P46091 355 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 RWDD2BP57060 319 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 MAXP61244 160 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 LRP8Q14114 963 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 KRT81Q14533 505 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 HADHQ16836 314 aaKnown RBP13.5□□□□□ -0.25
SMAD3-214ENST00000560402 LONRF2Q1L5Z9 754 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 MANEAQ5SRI9 462 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 DENND2CQ68D51 928 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 Q6ZVL8 140 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 USP53Q70EK8 1073 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 HDXQ7Z353 690 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 MAATS1Q7Z4T9 603 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 HSD11B1LQ7Z5J1 315 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 TECPR1Q7Z6L1 1165 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 NLRP8Q86W28 1048 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 ZSCAN1Q8NBB4 408 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 FATE1Q969F0 183 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 SCARF2Q96GP6 870 aaPredicted RBP13.5□□□□□ -0.25
SMAD3-214ENST00000560402 SPATS2LQ9NUQ6 558 aaKnown RBP13.5□□□□□ -0.25
SMAD3-214ENST00000560402 WDR70Q9NW82 654 aa13.5□□□□□ -0.25
SMAD3-214ENST00000560402 GOLGA6AQ9NYA3 693 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms