RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 LCMT1Q9UIC8 334 aa17.6■□□□□ 0.41
HDDC3-205ENST00000559898 CST8O60676 142 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 ITGA2BP08514 1039 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 CCL4P13236 92 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 CA5AP35218 305 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 RPL26P61254 145 aaKnown RBP17.59■□□□□ 0.41
HDDC3-205ENST00000559898 WASHC5Q12768 1159 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 NR1D2Q14995 579 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 PDK1Q15118 436 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 PRKD1Q15139 912 aaPredicted RBP17.59■□□□□ 0.41
HDDC3-205ENST00000559898 PHF19Q5T6S3 580 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 CHST15Q7LFX5 561 aaPredicted RBP17.59■□□□□ 0.41
HDDC3-205ENST00000559898 GPR155Q7Z3F1 870 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 NT5DC3Q86UY8 548 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 JAMLQ86YT9 394 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 EXD1Q8NHP7 514 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 KIAA1524Q8TCG1 905 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 GRAMD1AQ96CP6 724 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 SLC25A51Q9H1U9 297 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 FAM83DQ9H4H8 585 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 GLOD4Q9HC38 313 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 FOXJ2Q9P0K8 574 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 ZNHIT2Q9UHR6 403 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 TMPRSS11EQ9UL52 423 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 INTUQ9ULD6 942 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 RPL26L1Q9UNX3 145 aaKnown RBP17.59■□□□□ 0.41
HDDC3-205ENST00000559898 KCNK6Q9Y257 313 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 ATRXP46100 2492 aa17.59■□□□□ 0.41
HDDC3-205ENST00000559898 PRAMEF33A0A0G2JMD5 474 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 SOWAHDA6NJG2 315 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 RHPN2P1A8MT19 583 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 PRAMEF10O60809 474 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 PMPCBO75439 489 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 SLC1A1P43005 524 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 ARSDP51689 593 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 MAP9Q49MG5 647 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 KHDC1Q4VXA5 237 aaKnown RBP17.58■□□□□ 0.4
HDDC3-205ENST00000559898 TEX44Q53QW1 395 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 KIAA1614Q5VZ46 1190 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 ZC3H18Q86VM9 953 aaKnown RBP17.58■□□□□ 0.4
HDDC3-205ENST00000559898 VSIG1Q86XK7 387 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 GALNT13Q8IUC8 556 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 SLC37A2Q8TED4 501 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 UBL7Q96S82 380 aaPredicted RBP17.58■□□□□ 0.4
HDDC3-205ENST00000559898 CDH19Q9H159 772 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 DDX56Q9NY93 547 aaKnown RBP17.58■□□□□ 0.4
HDDC3-205ENST00000559898 ATXN10Q9UBB4 475 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 TBC1D29Q9UFV1 150 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 REXO2Q9Y3B8 237 aaKnown RBP17.58■□□□□ 0.4
HDDC3-205ENST00000559898 ZNF711Q9Y462 761 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 PCDHA13Q9Y5I0 950 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 DUSP10Q9Y6W6 482 aa17.58■□□□□ 0.4
HDDC3-205ENST00000559898 SDK2Q58EX2 2172 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 BAHCC1Q9P281 2608 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 hCG_1818297A0A087WSY0 165 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 IGHV1OR21-1A0A087WYE8 117 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 IGHV5-10-1A0A0J9YXX1 117 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 C9orf172C9J069 976 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 MTX2O75431 263 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 LCA5LO95447 670 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 ACP5P13686 325 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 ZNF8P17098 575 aaPredicted RBP17.57■□□□□ 0.4
HDDC3-205ENST00000559898 NFKB1P19838 968 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 CHRNA4P43681 627 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 MAPK10P53779 464 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 CDK18Q07002 472 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 PLA2G4EQ3MJ16 856 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 KDELC1Q6UW63 502 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 MICALCLQ6ZW33 695 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 TMC3Q7Z5M5 1100 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 ZFAND4Q86XD8 727 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 SLC39A7Q92504 469 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 USP7Q93009 1102 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 CCDC74BQ96LY2 380 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 TEKT5Q96M29 485 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 TMEM74Q96NL1 305 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 HEMGNQ9BXL5 484 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 SEMA4CQ9C0C4 833 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 STRADBQ9C0K7 418 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 ZFYVE1Q9HBF4 777 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 BPIFA1Q9NP55 256 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 WDR70Q9NW82 654 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 PKD2L2Q9NZM6 624 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 SLC23A2Q9UGH3 650 aa17.57■□□□□ 0.4
HDDC3-205ENST00000559898 A0A0U1RQJ8 604 aa17.56■□□□□ 0.4
HDDC3-205ENST00000559898 PPP1R12AO14974 1030 aaPredicted RBP17.56■□□□□ 0.4
HDDC3-205ENST00000559898 ATXN7O15265 892 aaPredicted RBP17.56■□□□□ 0.4
HDDC3-205ENST00000559898 GPR39O43194 453 aa17.56■□□□□ 0.4
HDDC3-205ENST00000559898 JMJD7P0C870 316 aa17.56■□□□□ 0.4
HDDC3-205ENST00000559898 BPIP17213 487 aa17.56■□□□□ 0.4
HDDC3-205ENST00000559898 WT1P19544 449 aaPredicted RBP17.56■□□□□ 0.4
HDDC3-205ENST00000559898 CA4P22748 312 aa17.56■□□□□ 0.4
HDDC3-205ENST00000559898 ZNF75DP51815 510 aa17.56■□□□□ 0.4
HDDC3-205ENST00000559898 HADHBP55084 474 aaKnown RBP17.56■□□□□ 0.4
HDDC3-205ENST00000559898 TMPRSS3P57727 454 aa17.56■□□□□ 0.4
HDDC3-205ENST00000559898 AADACL2Q6P093 401 aa17.56■□□□□ 0.4
HDDC3-205ENST00000559898 GAS2L3Q86XJ1 694 aa17.56■□□□□ 0.4
HDDC3-205ENST00000559898 OXNAD1Q96HP4 312 aaPredicted RBP17.56■□□□□ 0.4
HDDC3-205ENST00000559898 FAM118BQ9BPY3 351 aa17.56■□□□□ 0.4
HDDC3-205ENST00000559898 GORASP1Q9BQQ3 440 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms