RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 SLC32A1Q9H598 525 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 ERVMER34-1Q9H9K5 563 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 DBNDD1Q9H9R9 158 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 KCND2Q9NZV8 630 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 SLC9A2Q9UBY0 812 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 SARDHQ9UL12 918 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 A3GALT2U3KPV4 340 aa3.73□□□□□ -1.81
SPG11-218ENST00000559754 A0A0U1RQF3 1178 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 GTPBP10A4D1E9 387 aaKnown RBP3.72□□□□□ -1.81
SPG11-218ENST00000559754 LIPT2A6NK58 231 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 HSPB2A8KAH6 182 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 KDM4BO94953 1096 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 PTMAP06454 111 aaKnown RBP3.72□□□□□ -1.81
SPG11-218ENST00000559754 SPARCP09486 303 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 MCM3P25205 808 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 PSMA3P25788 255 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 EEF1DP29692 281 aaKnown RBP3.72□□□□□ -1.81
SPG11-218ENST00000559754 HNRNPH1P31943 449 aaKnown RBP3.72□□□□□ -1.81
SPG11-218ENST00000559754 PIGAP37287 484 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 ARL16Q0P5N6 197 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 AIMP1Q12904 312 aaKnown RBP3.72□□□□□ -1.81
SPG11-218ENST00000559754 CRYMQ14894 314 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 HSPB2Q16082 182 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 SYT16Q17RD7 645 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 TCP11X2Q5H9J9 407 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 ZNF766Q5HY98 468 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 C1orf141Q5JVX7 400 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 PMS2CLQ68D20 193 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 IL27RAQ6UWB1 636 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 MEX3BQ6ZN04 569 aaKnown RBP3.72□□□□□ -1.81
SPG11-218ENST00000559754 MFSD6Q6ZSS7 791 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 ZNF771Q7L3S4 317 aaPredicted RBP3.72□□□□□ -1.81
SPG11-218ENST00000559754 FAM160B2Q86V87 743 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 CEP57L1Q8IYX8 460 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 C17orf53Q8N3J3 647 aaPredicted RBP3.72□□□□□ -1.81
SPG11-218ENST00000559754 TNIP2Q8NFZ5 429 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 MAGEC3Q8TD91 643 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 ELP4Q96EB1 424 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 JAKMIP1Q96N16 626 aaKnown RBP3.72□□□□□ -1.81
SPG11-218ENST00000559754 MAK16Q9BXY0 300 aaKnown RBP3.72□□□□□ -1.81
SPG11-218ENST00000559754 SPRY4Q9C004 299 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 C2orf40Q9H1Z8 148 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 SMARCAD1Q9H4L7 1026 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 GRPEL1Q9HAV7 217 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 XAB2Q9HCS7 855 aaKnown RBP3.72□□□□□ -1.81
SPG11-218ENST00000559754 PDE7BQ9NP56 450 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 BABAM1Q9NWV8 329 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 IL1RAPL1Q9NZN1 696 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 EHD2Q9NZN4 543 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 ISY1Q9ULR0 285 aaKnown RBP3.72□□□□□ -1.81
SPG11-218ENST00000559754 CORO1CQ9ULV4 474 aaPredicted RBP3.72□□□□□ -1.81
SPG11-218ENST00000559754 CDC14AQ9UNH5 594 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 CARD8Q9Y2G2 431 aa3.72□□□□□ -1.81
SPG11-218ENST00000559754 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.72□□□□□ -1.81
SPG11-218ENST00000559754 FLT1P17948 1338 aa3.71□□□□□ -1.81
SPG11-218ENST00000559754 FAM172BPA6NC97 362 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 MYO1GB0I1T2 1018 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 TEX22C9J3V5 150 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 H0Y626 953 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 TGFB1I1O43294 461 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 TBX10O75333 385 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 RFPL2O75678 378 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 SEC14L2O76054 403 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 LINC00271P0C7V0 271 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 ATP5DP30049 168 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 RAD23AP54725 363 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 EIF3BP55884 814 aaKnown RBP3.71□□□□□ -1.82
SPG11-218ENST00000559754 TFCP2Q12800 502 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 ZNF155Q12901 538 aaPredicted RBP3.71□□□□□ -1.82
SPG11-218ENST00000559754 CCDC6Q16204 474 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 KYNUQ16719 465 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 GARNL3Q5VVW2 1013 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 C11orf88Q6PI97 169 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 NCEH1Q6PIU2 408 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 CCNI2Q6ZMN8 369 aaPredicted RBP3.71□□□□□ -1.82
SPG11-218ENST00000559754 FOXL2NBQ6ZUU3 175 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 TRMT1LQ7Z2T5 733 aaKnown RBP3.71□□□□□ -1.82
SPG11-218ENST00000559754 SLFN11Q7Z7L1 901 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 ADGRG6Q86SQ4 1221 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 ADGRA1Q86SQ6 560 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 ADGRF2Q8IZF7 708 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 OR8H3Q8N146 312 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 WDTC1Q8N5D0 677 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 ARL10Q8N8L6 244 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 SCCPDHQ8NBX0 429 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 GOT1L1Q8NHS2 421 aaPredicted RBP3.71□□□□□ -1.82
SPG11-218ENST00000559754 POMGNT1Q8WZA1 660 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 FIG4Q92562 907 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 ARHGEF2Q92974 986 aaKnown RBP3.71□□□□□ -1.82
SPG11-218ENST00000559754 ERGIC1Q969X5 290 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 FTOQ9C0B1 505 aaKnown RBP eCLIP3.71□□□□□ -1.82
SPG11-218ENST00000559754 MMP28Q9H239 520 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 SDF2L1Q9HCN8 221 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 SLC35C2Q9NQQ7 365 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 CISD1Q9NZ45 108 aaKnown RBP3.71□□□□□ -1.82
SPG11-218ENST00000559754 MPP6Q9NZW5 540 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.71□□□□□ -1.82
SPG11-218ENST00000559754 MTRRQ9UBK8 725 aa3.71□□□□□ -1.82
SPG11-218ENST00000559754 LIMA1Q9UHB6 759 aaKnown RBP3.71□□□□□ -1.82
SPG11-218ENST00000559754 RASAL2Q9UJF2 1139 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms