RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 FAM76BQ5HYJ3 339 aa11.72□□□□□ -0.53
CSPG4P12-201ENST00000558282 RPTNQ6XPR3 784 aa11.72□□□□□ -0.53
CSPG4P12-201ENST00000558282 C3orf67Q6ZVT6 689 aa11.72□□□□□ -0.53
CSPG4P12-201ENST00000558282 USP30Q70CQ3 517 aa11.72□□□□□ -0.53
CSPG4P12-201ENST00000558282 CYP4X1Q8N118 509 aa11.72□□□□□ -0.53
CSPG4P12-201ENST00000558282 POMGNT2Q8NAT1 580 aa11.72□□□□□ -0.53
CSPG4P12-201ENST00000558282 ARL15Q9NXU5 204 aa11.72□□□□□ -0.53
CSPG4P12-201ENST00000558282 CRYL1Q9Y2S2 319 aa11.72□□□□□ -0.53
CSPG4P12-201ENST00000558282 DCCP43146 1447 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 CSH1P0DML2 217 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 CSH2P0DML3 217 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 LHX1P48742 406 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 ORC1Q13415 861 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 EIF2S3LQ2VIR3 472 aaKnown RBP11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 RNASEH2BQ5TBB1 312 aaKnown RBP11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 ZNF438Q7Z4V0 828 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 BRSK2Q8IWQ3 736 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 OR52K2Q8NGK3 314 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 STOML3Q8TAV4 291 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 TMEM159Q96B96 161 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 KCTD7Q96MP8 289 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 ZDHHC18Q9NUE0 388 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 MEMO1Q9Y316 297 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 FAM86C2PA6NEL3 165 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 RPS3P23396 243 aaKnown RBP eCLIP11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 ABCG1P45844 678 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 LIMK2P53671 638 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 CDH15P55291 814 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 PON2Q15165 354 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 RFTN2Q52LD8 501 aaPredicted RBP11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 ZPBP2Q6X784 338 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 IRF2BP1Q8IU81 584 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 STON2Q8WXE9 905 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 RHBDF1Q96CC6 855 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 RDH12Q96NR8 316 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 MTMR9Q96QG7 549 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 MMP19Q99542 508 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 TREM1Q9NP99 234 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 ENTPD4Q9Y227 616 aa11.71□□□□□ -0.53
CSPG4P12-201ENST00000558282 DLGAP1O14490 977 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 FGF10O15520 208 aaPredicted RBP11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 FAM189A1O60320 539 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 RAMP2O60895 175 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 OR2B3O76000 313 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 SCGNO76038 276 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 YBX3P16989 372 aaKnown RBP eCLIP11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 ZNF24P17028 368 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 GTF2E2P29084 291 aaKnown RBP11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 LCN1P31025 176 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 RFX3P48380 749 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 TKTL1P51854 596 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 PPP2R2BQ00005 443 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 RHDQ02161 417 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 SPP2Q13103 211 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 CYP2A13Q16696 494 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 BMT2Q1RMZ1 405 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 C11orf91Q3C1V1 193 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 TMEM214Q6NUQ4 689 aaKnown RBP11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 TLDC1Q6P9B6 456 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 CHST15Q7LFX5 561 aaPredicted RBP11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 GLT6D1Q7Z4J2 308 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 ADGRF2Q8IZF7 708 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 ASB7Q9H672 318 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 RC3H2Q9HBD1 1191 aaKnown RBP11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 NDUFAF4Q9P032 175 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 RPL36Q9Y3U8 105 aaKnown RBP11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 RFPL2O75678 378 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 TYMPP19971 482 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 TTPAP49638 278 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 FAM98CQ17RN3 349 aaKnown RBP11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 CTC1Q2NKJ3 1217 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 VPS26BQ4G0F5 336 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 CMC1Q7Z7K0 106 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 ADGRD2Q7Z7M1 963 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 BPIFB1Q8TDL5 484 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 GAD1Q99259 594 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 SEC14L4Q9UDX3 406 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 VPS51Q9UID3 782 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 VWA7Q9Y334 891 aa11.71□□□□□ -0.54
CSPG4P12-201ENST00000558282 INMTO95050 263 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 OXSR1O95747 527 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 RHOAP61586 193 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 NOMO3P69849 1222 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 CRADDP78560 199 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 PPP3CAQ08209 521 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 CAMK1Q14012 370 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 NOMO1Q15155 1222 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 CRTC2Q53ET0 693 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 IL23RQ5VWK5 629 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 HHIPL2Q6UWX4 724 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 NPNTQ6UXI9 565 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 FBXO33Q7Z6M2 555 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 GJD3Q8N144 294 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 ZNF615Q8N8J6 731 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 CPT1BQ92523 772 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 CELF6Q96J87 481 aaKnown RBP11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 PPM1MQ96MI6 270 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 ERN1O75460 977 aaKnown RBP11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 UGT2B17O75795 530 aa11.7□□□□□ -0.54
CSPG4P12-201ENST00000558282 STAG3L1P0CL83 205 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms