RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 COQ6Q9Y2Z9 468 aa16.77■□□□□ 0.28
SNX1-203ENST00000558040 UNC80Q8N2C7 3258 aa16.77■□□□□ 0.27
SNX1-203ENST00000558040 IGLON5A6NGN9 336 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 HMGB1P1B2RPK0 211 aaPredicted RBP16.76■□□□□ 0.27
SNX1-203ENST00000558040 RNGTTO60942 597 aaKnown RBP16.76■□□□□ 0.27
SNX1-203ENST00000558040 SYF2O95926 243 aaKnown RBP16.76■□□□□ 0.27
SNX1-203ENST00000558040 S1PR4O95977 384 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 AHSGP02765 367 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 ITGA2BP08514 1039 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 GM2AP17900 193 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 CXCL12P48061 93 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 CLCN5P51795 746 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 DPTQ07507 201 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 DNAJC3Q13217 504 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 SGCGQ13326 291 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 SEMA3AQ14563 771 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 AGERQ15109 404 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 MAP7D1Q3KQU3 841 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 CWF19L1Q69YN2 538 aaKnown RBP16.76■□□□□ 0.27
SNX1-203ENST00000558040 LDB1Q86U70 411 aaPredicted RBP16.76■□□□□ 0.27
SNX1-203ENST00000558040 HORMAD1Q86X24 394 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 PIANPQ8IYJ0 282 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 NXPE1Q8N323 547 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 OR2T34Q8NGX1 318 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 SCAMP4Q969E2 229 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 VPS39Q96JC1 886 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 ATP6V1G3Q96LB4 118 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 C2orf42Q9NWW7 574 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 SENP1Q9P0U3 644 aa16.76■□□□□ 0.27
SNX1-203ENST00000558040 A0A1W2PQU0 124 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 PRR23AA6NEV1 266 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 FAM47DPA6NHR8 397 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 AGAP14A8MT82 685 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 TRIM49D1C9J1S8 452 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 HAUS5O94927 633 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 PRSS56P0CW18 603 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 UGT1A6P19224 532 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 UGT1A1P22309 533 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 UGT1A4P22310 534 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 ACRV1P26436 265 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 UGT1A3P35503 534 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 UGT1A5P35504 534 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 PTGER3P43115 390 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 POLD2P49005 469 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 CDKN1CP49918 316 aaPredicted RBP16.75■□□□□ 0.27
SNX1-203ENST00000558040 ITIH4Q14624 930 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 ATP13A5Q4VNC0 1218 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 TMEM259Q4ZIN3 620 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 MROH9Q5TGP6 573 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 SEL1L3Q68CR1 1132 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 MAMSTRQ6ZN01 415 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 MICALCLQ6ZW33 695 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 SERPINA9Q86WD7 417 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 TRIM69Q86WT6 500 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 RBFAQ8N0V3 343 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 ATXN7L3BQ96GX2 97 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 VPS35Q96QK1 796 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 MCMBPQ9BTE3 642 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 C1QTNF2Q9BXJ5 285 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 CCDC68Q9H2F9 335 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 EBF1Q9UH73 591 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 PLXNA2O75051 1894 aa16.75■□□□□ 0.27
SNX1-203ENST00000558040 UBA6A0AVT1 1052 aaPredicted RBP16.74■□□□□ 0.27
SNX1-203ENST00000558040 SEMA4FO95754 770 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 MT-ND3P03897 115 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 ZNF7P17097 686 aaPredicted RBP16.74■□□□□ 0.27
SNX1-203ENST00000558040 AOC1P19801 751 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 GABRB3P28472 473 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 GPR1P46091 355 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 ADARP55265 1226 aaKnown RBP16.74■□□□□ 0.27
SNX1-203ENST00000558040 BMPR2Q13873 1038 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 DBN1Q16643 649 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 TNFAIP8L3Q5GJ75 292 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 RAET1GQ6H3X3 334 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 CNSTQ6PJW8 725 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 MTERF4Q7Z6M4 381 aaKnown RBP16.74■□□□□ 0.27
SNX1-203ENST00000558040 CYP4X1Q8N118 509 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 GPATCH11Q8N954 259 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 HEXDCQ8WVB3 486 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 ASB12Q8WXK4 309 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 LPGAT1Q92604 370 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 ARL8AQ96BM9 186 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 COPS8Q99627 209 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 GPR22Q99680 433 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 SLC17A9Q9BYT1 436 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 ZDHHC3Q9NYG2 299 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 CYP8B1Q9UNU6 501 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 NOVA2Q9UNW9 492 aaKnown RBP16.74■□□□□ 0.27
SNX1-203ENST00000558040 ZFR2Q9UPR6 939 aaKnown RBP16.74■□□□□ 0.27
SNX1-203ENST00000558040 COMMD10Q9Y6G5 202 aa16.74■□□□□ 0.27
SNX1-203ENST00000558040 FAM95CA0A1B0GW59 222 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 TMEM221A6NGB7 291 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 CFAP99D6REC4 459 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 M0R296 226 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 GPR39O43194 453 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 PDGFBP01127 241 aaPredicted RBP16.73■□□□□ 0.27
SNX1-203ENST00000558040 F7P08709 466 aaPredicted RBP16.73■□□□□ 0.27
SNX1-203ENST00000558040 RALBP11234 206 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 CD6P30203 668 aa16.73■□□□□ 0.27
SNX1-203ENST00000558040 ACSL1P33121 698 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms