RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 TRBV23OR9-2A0A075B6M9 112 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 A0A0U1RQS6 177 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 OR5K4A6NMS3 321 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 ZNF487B1APH4 448 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 CBFA2T2O43439 604 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 DUX1O43812 170 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 MAP3K6O95382 1288 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 PRLP01236 227 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 HLA-DQB2P05538 268 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 FGF3P11487 239 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 CCL4P13236 92 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 ZFXP17010 805 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 KDELR1P24390 212 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 ARHGAP25P42331 645 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 NOP2P46087 812 aaKnown RBP13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 RAB15P59190 212 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 GBE1Q04446 702 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 TRIM14Q14142 442 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 MESDQ14696 234 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 PDK1Q15118 436 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 DCAF12Q5T6F0 453 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 NKAIN2Q5VXU1 208 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 WDR74Q6RFH5 385 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 CHST15Q7LFX5 561 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 LYSMD3Q7Z3D4 306 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 SLC9B2Q86UD5 537 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 TRIM74Q86UV6 250 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 VSIG1Q86XK7 387 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 SFRP1Q8N474 314 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 IL22RA1Q8N6P7 574 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 PTCD2Q8WV60 388 aaKnown RBP13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 SRPK1Q96SB4 655 aaKnown RBP13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 HERPUD2Q9BSE4 406 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 DDA1Q9BW61 102 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 BRD8Q9H0E9 1235 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 SLC39A1Q9NY26 324 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 DTLQ9NZJ0 730 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 FOXJ2Q9P0K8 574 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 PLEKHM1Q9Y4G2 1056 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 HEY1Q9Y5J3 304 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 HEMK1Q9Y5R4 338 aaPredicted RBP13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 ST14Q9Y5Y6 855 aa13.5□□□□□ -0.25
SNRPA1-204ENST00000558020 SCN8AQ9UQD0 1980 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 KIR2DS5A0A0G2JLQ3 304 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 A0A0G2JNG1 304 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 LRRD1A4D1F6 860 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 B4E171 279 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 GPR89AB7ZAQ6 455 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 KIR2DS3K7RE56 304 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 KCNK1O00180 336 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 ATP1A1P05023 1023 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 TMEM253P0C7T8 217 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 GPR89BP0CG08 455 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 TSPAN7P41732 249 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 CD86P42081 329 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 TAS2R40P59535 323 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 IFI35P80217 286 aaPredicted RBP13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 HHEXQ03014 270 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 PPIDQ08752 370 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 NIPAL4Q0D2K0 466 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 AP1B1Q10567 949 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 SLC10A2Q12908 348 aaPredicted RBP13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 KIR2DS5Q14953 304 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 IYDQ6PHW0 289 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 BZW1Q7L1Q6 419 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 FAM129CQ86XR2 697 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 PHYKPLQ8IUZ5 450 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 PQLC3Q8N755 202 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 SLC37A2Q8TED4 501 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 ART4Q93070 314 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 TEFMQ96QE5 360 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 SMIM14Q96QK8 99 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 AGAP2Q99490 1192 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 SEMA4CQ9C0C4 833 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 EPB41L1Q9H4G0 881 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 ZFYVE1Q9HBF4 777 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 SARS2Q9NP81 518 aaKnown RBP13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 PDP2Q9P2J9 529 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 PCDHGA4Q9Y5G9 962 aa13.49□□□□□ -0.25
SNRPA1-204ENST00000558020 SSU72P8A0A1W2PR75 194 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 APOL1O14791 398 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 PPP1R12AO14974 1030 aaPredicted RBP13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 CAPN5O15484 640 aaPredicted RBP13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 GRID2O43424 1007 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 SLC25A14O95258 325 aaPredicted RBP13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 THRAP10827 490 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 TNNT3P45378 269 aaPredicted RBP13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 IHHQ14623 411 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 QPCTQ16769 361 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 HENMT1Q5T8I9 393 aaKnown RBP13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 NT5DC3Q86UY8 548 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 VASH2Q86V25 355 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 RHOT2Q8IXI1 618 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 SLC35G2Q8TBE7 412 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 NCSTNQ92542 709 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 RAPGEF5Q92565 580 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 EXTL1Q92935 676 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 NKD1Q969G9 470 aa13.48□□□□□ -0.25
SNRPA1-204ENST00000558020 CCDC42Q96M95 316 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms