RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 GLYATL1Q969I3 302 aa25.36■■□□□ 1.65
SMAD6-202ENST00000557916 SLC13A1Q9BZW2 595 aa25.36■■□□□ 1.65
SMAD6-202ENST00000557916 IL22Q9GZX6 179 aa25.36■■□□□ 1.65
SMAD6-202ENST00000557916 MRPL40Q9NQ50 206 aaKnown RBP25.36■■□□□ 1.65
SMAD6-202ENST00000557916 MOSPD1Q9UJG1 213 aa25.36■■□□□ 1.65
SMAD6-202ENST00000557916 TMEM98Q9Y2Y6 226 aa25.36■■□□□ 1.65
SMAD6-202ENST00000557916 CFAP54Q96N23 3096 aa25.35■■□□□ 1.65
SMAD6-202ENST00000557916 CCDC78A2IDD5 438 aa25.35■■□□□ 1.65
SMAD6-202ENST00000557916 CCL22O00626 93 aa25.35■■□□□ 1.65
SMAD6-202ENST00000557916 GAPDHSO14556 408 aaPredicted RBP25.35■■□□□ 1.65
SMAD6-202ENST00000557916 SLC25A14O95258 325 aaPredicted RBP25.35■■□□□ 1.65
SMAD6-202ENST00000557916 RASGRP1O95267 797 aa25.35■■□□□ 1.65
SMAD6-202ENST00000557916 CEACAM5P06731 702 aa25.35■■□□□ 1.65
SMAD6-202ENST00000557916 CD59P13987 128 aa25.35■■□□□ 1.65
SMAD6-202ENST00000557916 POLD2P49005 469 aa25.35■■□□□ 1.65
SMAD6-202ENST00000557916 HK3P52790 923 aa25.35■■□□□ 1.65
SMAD6-202ENST00000557916 SKIDA1Q1XH10 827 aa25.35■■□□□ 1.65
SMAD6-202ENST00000557916 RSPO4Q2I0M5 234 aaPredicted RBP25.35■■□□□ 1.65
SMAD6-202ENST00000557916 KCTD16Q68DU8 428 aa25.35■■□□□ 1.65
SMAD6-202ENST00000557916 CAND1Q86VP6 1230 aaKnown RBP25.35■■□□□ 1.65
SMAD6-202ENST00000557916 PDXPQ96GD0 296 aa25.35■■□□□ 1.65
SMAD6-202ENST00000557916 VPS35Q96QK1 796 aa25.35■■□□□ 1.65
SMAD6-202ENST00000557916 TCEAL2Q9H3H9 227 aaPredicted RBP25.35■■□□□ 1.65
SMAD6-202ENST00000557916 XAB2Q9HCS7 855 aaKnown RBP25.35■■□□□ 1.65
SMAD6-202ENST00000557916 APOBEC3BQ9UH17 382 aaKnown RBP25.35■■□□□ 1.65
SMAD6-202ENST00000557916 SLC17A4Q9Y2C5 497 aa25.35■■□□□ 1.65
SMAD6-202ENST00000557916 TCAF1Q9Y4C2 921 aa25.35■■□□□ 1.65
SMAD6-202ENST00000557916 DMXL1Q9Y485 3027 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 FAM187AA6NFU0 413 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 SLC30A4O14863 429 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 RAD51CO43502 376 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 UGT1A9O60656 530 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 AVILO75366 819 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 PIAS2O75928 621 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 SRP72O76094 671 aaKnown RBP25.34■■□□□ 1.65
SMAD6-202ENST00000557916 PRAMEF1O95521 474 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 ASMTLO95671 621 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 TNFP01375 233 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 MLNP12872 115 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 UGT1A6P19224 532 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 UGT1A1P22309 533 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 UGT1A4P22310 534 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 MGAT1P26572 445 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 UGT1A3P35503 534 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 UGT1A5P35504 534 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 CRADDP78560 199 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 XIAPP98170 497 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 ITGA9Q13797 1035 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 NLRP9Q7RTR0 991 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 ZNF398Q8TD17 642 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 SERPINB12Q96P63 405 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 TRIM31Q9BZY9 425 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 UGT1A7Q9HAW7 530 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 UGT1A10Q9HAW8 530 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 UGT1A8Q9HAW9 530 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 CYP4F12Q9HCS2 524 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 TMPRSS11EQ9UL52 423 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 OAS3Q9Y6K5 1087 aaKnown RBP25.34■■□□□ 1.65
SMAD6-202ENST00000557916 DGKBQ9Y6T7 804 aa25.34■■□□□ 1.65
SMAD6-202ENST00000557916 MYLKQ15746 1914 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 CABIN1Q9Y6J0 2220 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 PRSS38A1L453 326 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 EFCAB8A8MWE9 144 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 SDHBP21912 280 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 DGKAP23743 735 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 PEX6Q13608 980 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 TSTD2Q5T7W7 516 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 DBX2Q6ZNG2 339 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 HOOK3Q86VS8 718 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 PHYKPLQ8IUZ5 450 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 MNS1Q8NEH6 495 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 CDKN2AIPNLQ96HQ2 116 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 ASB8Q9H765 288 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 ARFGAP3Q9NP61 516 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 CHRAC1Q9NRG0 131 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 UCKL1Q9NWZ5 548 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 RIMKLBQ9ULI2 386 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 CEP250Q9BV73 2442 aa25.33■■□□□ 1.65
SMAD6-202ENST00000557916 H7C0S8 307 aa25.32■■□□□ 1.64
SMAD6-202ENST00000557916 GPR39O43194 453 aa25.32■■□□□ 1.64
SMAD6-202ENST00000557916 FUCA1P04066 466 aa25.32■■□□□ 1.64
SMAD6-202ENST00000557916 PSMA3P25788 255 aa25.32■■□□□ 1.64
SMAD6-202ENST00000557916 MC4RP32245 332 aa25.32■■□□□ 1.64
SMAD6-202ENST00000557916 PRRT3Q5FWE3 981 aa25.32■■□□□ 1.64
SMAD6-202ENST00000557916 SLC25A45Q8N413 288 aa25.32■■□□□ 1.64
SMAD6-202ENST00000557916 ZNF548Q8NEK5 533 aaPredicted RBP25.32■■□□□ 1.64
SMAD6-202ENST00000557916 GDAP1Q8TB36 358 aa25.32■■□□□ 1.64
SMAD6-202ENST00000557916 SNF8Q96H20 258 aa25.32■■□□□ 1.64
SMAD6-202ENST00000557916 ZNF778Q96MU6 729 aa25.32■■□□□ 1.64
SMAD6-202ENST00000557916 SUDS3Q9H7L9 328 aaPredicted RBP25.32■■□□□ 1.64
SMAD6-202ENST00000557916 CARS2Q9HA77 564 aaKnown RBP25.32■■□□□ 1.64
SMAD6-202ENST00000557916 SYBUQ9NX95 663 aa25.32■■□□□ 1.64
SMAD6-202ENST00000557916 SPASTQ9UBP0 616 aa25.32■■□□□ 1.64
SMAD6-202ENST00000557916 SUFUQ9UMX1 484 aa25.32■■□□□ 1.64
SMAD6-202ENST00000557916 DNAH14Q0VDD8 3507 aa25.31■■□□□ 1.64
SMAD6-202ENST00000557916 SCAMP1O15126 338 aa25.31■■□□□ 1.64
SMAD6-202ENST00000557916 FLRT2O43155 660 aa25.31■■□□□ 1.64
SMAD6-202ENST00000557916 CTSEP14091 401 aa25.31■■□□□ 1.64
SMAD6-202ENST00000557916 ZNF648Q5T619 568 aaPredicted RBP25.31■■□□□ 1.64
SMAD6-202ENST00000557916 MARK2Q7KZI7 788 aaKnown RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms