RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 SLC4A11Q8NBS3 891 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 CNNM3Q8NE01 707 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 IPMKQ8NFU5 416 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 NEK11Q8NG66 645 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 PRCCQ92733 491 aaPredicted RBP3.81□□□□□ -1.8
TDP1-217ENST00000557782 IGSF8Q969P0 613 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 SPSB1Q96BD6 273 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 OTULINQ96BN8 352 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 NXNL1Q96CM4 212 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 MSI2Q96DH6 328 aaKnown RBP3.81□□□□□ -1.8
TDP1-217ENST00000557782 VCPIP1Q96JH7 1222 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 SLC41A2Q96JW4 573 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 ADAM2Q99965 735 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 PCGF1Q9BSM1 259 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 NYXQ9GZU5 481 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 ZNF768Q9H5H4 540 aaKnown RBP3.81□□□□□ -1.8
TDP1-217ENST00000557782 ACTR5Q9H9F9 607 aaPredicted RBP3.81□□□□□ -1.8
TDP1-217ENST00000557782 POLE3Q9NRF9 147 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 KCTD5Q9NXV2 234 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 TAS2R14Q9NYV8 317 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 STK26Q9P289 416 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 FBXW2Q9UKT8 454 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 RPH3AQ9Y2J0 694 aaPredicted RBP3.81□□□□□ -1.8
TDP1-217ENST00000557782 KIF3AQ9Y496 699 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 CLIC4Q9Y696 253 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 EPN1Q9Y6I3 576 aaPredicted RBP3.81□□□□□ -1.8
TDP1-217ENST00000557782 A3GALT2U3KPV4 340 aa3.81□□□□□ -1.8
TDP1-217ENST00000557782 KAT6AQ92794 2004 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 CARMIL2Q6F5E8 1435 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 ZNF536O15090 1300 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 A0A0B4J293 547 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 CXorf65A6NEN9 183 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 UNC119BA6NIH7 251 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 FAM86B1E9PN63 330 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 K7EPI3 171 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 MAP2K7O14733 419 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 SMAD9O15198 467 aaKnown RBP3.8□□□□□ -1.8
TDP1-217ENST00000557782 RNMTO43148 476 aaKnown RBP3.8□□□□□ -1.8
TDP1-217ENST00000557782 ZBTB43O43298 467 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 SMPD2O60906 423 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 GCATO75600 419 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 TTLL1O95922 423 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 LCKP06239 509 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 MMP2P08253 660 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 EBLN1P0CF75 366 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 KRT13P13646 458 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 RPS2P15880 293 aaKnown RBP3.8□□□□□ -1.8
TDP1-217ENST00000557782 GNAZP19086 355 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 IDUAP35475 653 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 IL15P40933 162 aaPredicted RBP3.8□□□□□ -1.8
TDP1-217ENST00000557782 FOLR3P41439 243 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 ZNF132P52740 706 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 CYP4F2P78329 520 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 GUCY1B3Q02153 619 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 LRRC74AQ0VAA2 488 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 LARS2Q15031 903 aaKnown RBP3.8□□□□□ -1.8
TDP1-217ENST00000557782 UGCGQ16739 394 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 CDO1Q16878 200 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 SOWAHAQ2M3V2 549 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 VWC2Q2TAL6 325 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 FAM98BQ52LJ0 330 aaKnown RBP3.8□□□□□ -1.8
TDP1-217ENST00000557782 AARS2Q5JTZ9 985 aaKnown RBP3.8□□□□□ -1.8
TDP1-217ENST00000557782 NT5DC1Q5TFE4 455 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 C12orf60Q5U649 245 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 MCTP1Q6DN14 999 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 FBXO42Q6P3S6 717 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 CASC4Q6P4E1 433 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 ATG14Q6ZNE5 492 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 DPPA4Q7L190 304 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 CYB5R4Q7L1T6 521 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 BCDIN3DQ7Z5W3 292 aaKnown RBP3.8□□□□□ -1.8
TDP1-217ENST00000557782 NOXA1Q86UR1 476 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 ARHGEF25Q86VW2 580 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 SLC35F3Q8IY50 421 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 TERB1Q8NA31 727 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 DENND6BQ8NEG7 585 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 BEST2Q8NFU1 509 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 ZNF606Q8WXB4 792 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 ATL1Q8WXF7 558 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 CCDC17Q96LX7 622 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 ZNF570Q96NI8 536 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 LRRC3BQ96PB8 259 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 MS4A10Q96PG2 267 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 SMC6Q96SB8 1091 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 SEPHS2Q99611 448 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 KATNB1Q9BVA0 655 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 TEX13BQ9BXU2 312 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 DPH5Q9H2P9 285 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 AKIRIN1Q9H9L7 192 aaPredicted RBP3.8□□□□□ -1.8
TDP1-217ENST00000557782 WDR6Q9NNW5 1121 aaKnown RBP3.8□□□□□ -1.8
TDP1-217ENST00000557782 PRMT8Q9NR22 394 aaPredicted RBP3.8□□□□□ -1.8
TDP1-217ENST00000557782 SERTAD4Q9NUC0 356 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 MTMR10Q9NXD2 777 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 HMG20BQ9P0W2 317 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 STK17AQ9UEE5 414 aa3.8□□□□□ -1.8
TDP1-217ENST00000557782 IPO11Q9UI26 975 aaKnown RBP3.8□□□□□ -1.8
TDP1-217ENST00000557782 TDRKHQ9Y2W6 561 aaKnown RBP3.8□□□□□ -1.8
TDP1-217ENST00000557782 ATP8B3O60423 1300 aa3.79□□□□□ -1.8
TDP1-217ENST00000557782 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.79□□□□□ -1.8
TDP1-217ENST00000557782 A0A0U1RQF3 1178 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms