RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 SNX20Q7Z614 316 aa13.59□□□□□ -0.23
SHMT2-234ENST00000557703 JAMLQ86YT9 394 aa13.59□□□□□ -0.23
SHMT2-234ENST00000557703 CCNJLQ8IV13 435 aa13.59□□□□□ -0.23
SHMT2-234ENST00000557703 NAT8LQ8N9F0 302 aa13.59□□□□□ -0.23
SHMT2-234ENST00000557703 PPHLN1Q8NEY8 458 aaKnown RBP13.59□□□□□ -0.23
SHMT2-234ENST00000557703 GLYATL1Q969I3 302 aa13.59□□□□□ -0.23
SHMT2-234ENST00000557703 SMIM14Q96QK8 99 aa13.59□□□□□ -0.23
SHMT2-234ENST00000557703 DNAJC28Q9NX36 388 aa13.59□□□□□ -0.23
SHMT2-234ENST00000557703 FNDC3AQ9Y2H6 1198 aaKnown RBP13.59□□□□□ -0.23
SHMT2-234ENST00000557703 DNMT3AQ9Y6K1 912 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-234ENST00000557703 PRSS38A1L453 326 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 SDR42E2A6NKP2 422 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 LMO7DNF2Z398 122 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 F8W8V4 182 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 K7ESM1 405 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 GDF9O60383 454 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 SRP72O76094 671 aaKnown RBP13.58□□□□□ -0.24
SHMT2-234ENST00000557703 CEACAM5P06731 702 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 RALBP11234 206 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 CEACAM1P13688 526 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 CD59P13987 128 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 CTSEP14091 401 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 ITGALP20701 1170 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 DGKAP23743 735 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 DRG2P55039 364 aaKnown RBP13.58□□□□□ -0.24
SHMT2-234ENST00000557703 NFATC2Q13469 925 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 POU6F1Q14863 301 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 TRIP13Q15645 432 aaPredicted RBP13.58□□□□□ -0.24
SHMT2-234ENST00000557703 GLE1Q53GS7 698 aaKnown RBP13.58□□□□□ -0.24
SHMT2-234ENST00000557703 FAM182AQ5T1J6 154 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 LYPLAL1Q5VWZ2 237 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 LAYNQ6UX15 382 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 CERS6Q6ZMG9 384 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 PIP4P1Q86T03 277 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 KLHL7Q8IXQ5 586 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 PHACTR4Q8IZ21 702 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 DDHD1Q8NEL9 900 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 ZNF398Q8TD17 642 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.58□□□□□ -0.24
SHMT2-234ENST00000557703 LRRC39Q96DD0 335 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 SNF8Q96H20 258 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 CDKN2AIPNLQ96HQ2 116 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 KRT12Q99456 494 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 KIFC1Q9BW19 673 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 FAM129AQ9BZQ8 928 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 RAB17Q9H0T7 212 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 RXFP3Q9NSD7 469 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 NLGN3Q9NZ94 848 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 APOBEC3BQ9UH17 382 aaKnown RBP13.58□□□□□ -0.24
SHMT2-234ENST00000557703 CD84Q9UIB8 345 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 CNOT6Q9ULM6 557 aaKnown RBP13.58□□□□□ -0.24
SHMT2-234ENST00000557703 GPR34Q9UPC5 381 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 UTP11Q9Y3A2 253 aaKnown RBP13.58□□□□□ -0.24
SHMT2-234ENST00000557703 TCAF1Q9Y4C2 921 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 MRFAP1Q9Y605 127 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 SLC30A1Q9Y6M5 507 aa13.58□□□□□ -0.24
SHMT2-234ENST00000557703 ADAMTS9Q9P2N4 1935 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 TMEM202A6NGA9 273 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 QSOX1O00391 747 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 AQP9O43315 295 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 PRAMEF1O95521 474 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 GSTM1P09488 218 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 TPH1P17752 444 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 PAMP19021 973 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 IVDP26440 423 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 MAGEA3P43357 314 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 VPS41P49754 854 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 XIAPP98170 497 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 GSTM4Q03013 218 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 CAV1Q03135 178 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 OLIG2Q13516 323 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 SHBQ15464 509 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 ALG11Q2TAA5 492 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 ATP13A5Q4VNC0 1218 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 TSTD2Q5T7W7 516 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 RNASEH2BQ5TBB1 312 aaKnown RBP13.57□□□□□ -0.24
SHMT2-234ENST00000557703 KANSL1Q7Z3B3 1105 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 GLRX5Q86SX6 157 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 PRUNE1Q86TP1 453 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 GKN2Q86XP6 184 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 MPP5Q8N3R9 675 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 CEP112Q8N8E3 955 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 FAM181AQ8N9Y4 354 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 ZNF592Q92610 1267 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 GLMNQ92990 594 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 TTC25Q96NG3 672 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 ERP44Q9BS26 406 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 LGR4Q9BXB1 951 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 SAMD15Q9P1V8 674 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 WHRNQ9P202 907 aa13.57□□□□□ -0.24
SHMT2-234ENST00000557703 TRBV5-4A0A0C4DH59 114 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 A0A0U1RQS6 177 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 FAM237BA0A1B0GVD1 139 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 CTAGE15A4D2H0 777 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 EFCAB8A8MWE9 144 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 FADS2P1A8MWK0 482 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 CFAP99D6REC4 459 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 CHUKO15111 745 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 PFDN6O15212 129 aa13.56□□□□□ -0.24
SHMT2-234ENST00000557703 NUAK1O60285 661 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms