RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 GOT2P00505 430 aaKnown RBP15.18■□□□□ 0.02
NEDD1-213ENST00000557644 MYBL2P10244 700 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 GNSP15586 552 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 PRAMEP78395 509 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 CDK3Q00526 305 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 NFATC2Q13469 925 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 ZNF648Q5T619 568 aaPredicted RBP15.18■□□□□ 0.02
NEDD1-213ENST00000557644 MFSD2AQ8NA29 543 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 UBXN4Q92575 508 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 ASB8Q9H765 288 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 ZC3H7BQ9UGR2 993 aaKnown RBP15.18■□□□□ 0.02
NEDD1-213ENST00000557644 APPL1Q9UKG1 709 aa15.18■□□□□ 0.02
NEDD1-213ENST00000557644 A0A1B0GVT2 93 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 MTX2O75431 263 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 CFIP05156 583 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 PGAM1P18669 254 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 PDE1CQ14123 709 aaPredicted RBP15.17■□□□□ 0.02
NEDD1-213ENST00000557644 CRYMQ14894 314 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 KCTD16Q68DU8 428 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 ADAMTSL4Q6UY14 1074 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 PIANPQ8IYJ0 282 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 ZNF398Q8TD17 642 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 PEX13Q92968 403 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 LRRC39Q96DD0 335 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 KLHDC7BQ96G42 594 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 FMO2Q99518 471 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 C19orf43Q9BQ61 176 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 TEX101Q9BY14 249 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 OTOGLQ3ZCN5 2332 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 TLR4O00206 839 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 USP1O94782 785 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 LMNAP02545 664 aaKnown RBP15.17■□□□□ 0.02
NEDD1-213ENST00000557644 RABIFP47224 123 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 ARCN1P48444 511 aaKnown RBP15.17■□□□□ 0.02
NEDD1-213ENST00000557644 BNC1Q01954 994 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 NHLH1Q02575 133 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 ZRANB3Q5FWF4 1079 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 TCEAL6Q6IPX3 200 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 PSAPL1Q6NUJ1 521 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 UNC5AQ6ZN44 842 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 CAPN12Q6ZSI9 719 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 SPATS2Q86XZ4 545 aaKnown RBP15.17■□□□□ 0.02
NEDD1-213ENST00000557644 TCEAL3Q969E4 200 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 CCDC97Q96F63 343 aaPredicted RBP15.17■□□□□ 0.02
NEDD1-213ENST00000557644 C9orf72Q96LT7 481 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 SUSD2Q9UGT4 822 aa15.17■□□□□ 0.02
NEDD1-213ENST00000557644 PNMA8BQ9ULN7 279 aaPredicted RBP15.17■□□□□ 0.02
NEDD1-213ENST00000557644 OAS3Q9Y6K5 1087 aaKnown RBP15.17■□□□□ 0.02
NEDD1-213ENST00000557644 EP300Q09472 2414 aaPredicted RBP15.16■□□□□ 0.02
NEDD1-213ENST00000557644 PI4KAP42356 2102 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 TMEM202A6NGA9 273 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 VILLO15195 856 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 POLBP06746 335 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 CBLBQ13191 982 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 KHDC1Q4VXA5 237 aaKnown RBP15.16■□□□□ 0.02
NEDD1-213ENST00000557644 TRIM61Q5EBN2 209 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 PRAMEF14Q5SWL7 426 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 PYROXD1Q8WU10 500 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 NAT14Q8WUY8 206 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 BTN2A2Q8WVV5 523 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 GLYATL1Q969I3 302 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 HIC2Q96JB3 615 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 GPR27Q9NS67 375 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 MTRF1LQ9UGC7 380 aaKnown RBP15.16■□□□□ 0.02
NEDD1-213ENST00000557644 TMEM98Q9Y2Y6 226 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 PCDHGA5Q9Y5G8 931 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 SLC30A1Q9Y6M5 507 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 CACNA1EQ15878 2313 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 EIF3HO15372 352 aaKnown RBP eCLIP15.16■□□□□ 0.02
NEDD1-213ENST00000557644 SLC25A14O95258 325 aaPredicted RBP15.16■□□□□ 0.02
NEDD1-213ENST00000557644 RETP07949 1114 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 FAM153BP0C7A2 387 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 FOXN2P32314 431 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 HOXD12P35452 270 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 ITGA9Q13797 1035 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 DUOXA1Q1HG43 343 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 KIF19Q2TAC6 998 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 FAM153CQ494X1 144 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 KIAA0930Q6ICG6 404 aaPredicted RBP15.16■□□□□ 0.02
NEDD1-213ENST00000557644 DOK6Q6PKX4 331 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 AFTPHQ6ULP2 937 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 SNX20Q7Z614 316 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 LDB1Q86U70 411 aaPredicted RBP15.16■□□□□ 0.02
NEDD1-213ENST00000557644 IQCHQ86VS3 1027 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 OR4L1Q8NH43 312 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 COX14Q96I36 57 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 FAM129AQ9BZQ8 928 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 MARCH4Q9P2E8 410 aaPredicted RBP15.16■□□□□ 0.02
NEDD1-213ENST00000557644 ANKRD6Q9Y2G4 727 aa15.16■□□□□ 0.02
NEDD1-213ENST00000557644 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.16■□□□□ 0.02
NEDD1-213ENST00000557644 PRR5-ARHGAP8B1AHC4 643 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 F7P08709 466 aaPredicted RBP15.15■□□□□ 0.02
NEDD1-213ENST00000557644 MYCLP1P12525 358 aaPredicted RBP15.15■□□□□ 0.02
NEDD1-213ENST00000557644 ITGALP20701 1170 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 TEAD1P28347 426 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 MAGEA4P43358 317 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 POLD2P49005 469 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 THOP1P52888 689 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 YPEL5P62699 121 aa15.15■□□□□ 0.02
NEDD1-213ENST00000557644 VSNL1P62760 191 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms