RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 SUGP1Q8IWZ8 645 aaKnown RBP12.41□□□□□ -0.42
SHMT2-233ENST00000557529 NKAPQ8N5F7 415 aaKnown RBP12.41□□□□□ -0.42
SHMT2-233ENST00000557529 OR6Y1Q8NGX8 325 aa12.41□□□□□ -0.42
SHMT2-233ENST00000557529 DTX3LQ8TDB6 740 aa12.41□□□□□ -0.42
SHMT2-233ENST00000557529 ANKRD49Q8WVL7 239 aa12.41□□□□□ -0.42
SHMT2-233ENST00000557529 SUSD6Q92537 303 aa12.41□□□□□ -0.42
SHMT2-233ENST00000557529 KCNJ9Q92806 393 aa12.41□□□□□ -0.42
SHMT2-233ENST00000557529 FGF14Q92915 247 aa12.41□□□□□ -0.42
SHMT2-233ENST00000557529 ULK4Q96C45 1275 aa12.41□□□□□ -0.42
SHMT2-233ENST00000557529 BIRC8Q96P09 236 aa12.41□□□□□ -0.42
SHMT2-233ENST00000557529 SIKE1Q9BRV8 207 aa12.41□□□□□ -0.42
SHMT2-233ENST00000557529 CLPBQ9H078 707 aa12.41□□□□□ -0.42
SHMT2-233ENST00000557529 CDH19Q9H159 772 aa12.41□□□□□ -0.42
SHMT2-233ENST00000557529 P2RY12Q9H244 342 aa12.41□□□□□ -0.42
SHMT2-233ENST00000557529 TMEM245Q9H330 911 aa12.41□□□□□ -0.42
SHMT2-233ENST00000557529 MTG2Q9H4K7 406 aa12.41□□□□□ -0.42
SHMT2-233ENST00000557529 NPHS2Q9NP85 383 aa12.41□□□□□ -0.42
SHMT2-233ENST00000557529 PCDH12Q9NPG4 1184 aa12.41□□□□□ -0.42
SHMT2-233ENST00000557529 THAP10Q9P2Z0 257 aaPredicted RBP12.41□□□□□ -0.42
SHMT2-233ENST00000557529 SUN2Q9UH99 717 aa12.41□□□□□ -0.42
SHMT2-233ENST00000557529 CRLS1Q9UJA2 301 aa12.41□□□□□ -0.42
SHMT2-233ENST00000557529 OAS3Q9Y6K5 1087 aaKnown RBP12.41□□□□□ -0.42
SHMT2-233ENST00000557529 DOCK8Q8NF50 2099 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 A0A1W2PPC1 479 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 C16orf96A6NNT2 1141 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 AGAP14A8MT82 685 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 F8W8V4 182 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 SNUPNO95149 360 aaKnown RBP12.4□□□□□ -0.42
SHMT2-233ENST00000557529 C1SP09871 688 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 SBK3P0C264 359 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 ITGB7P26010 798 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 ACRV1P26436 265 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 SPINT3P49223 89 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 DCDC1P59894 354 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 DNAJB13P59910 316 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 ABCE1P61221 599 aaKnown RBP12.4□□□□□ -0.42
SHMT2-233ENST00000557529 ATP6V0D1P61421 351 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 TIAL1Q01085 375 aaKnown RBP eCLIP12.4□□□□□ -0.427e-9■■□□□ 13.1
SHMT2-233ENST00000557529 PFKPQ01813 784 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 OVGP1Q12889 678 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 CHRNA6Q15825 494 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 CTSL3PQ5NE16 218 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 TMEM207Q6UWW9 146 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 TRPM8Q7Z2W7 1104 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 TTC7BQ86TV6 843 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 RAVER1Q8IY67 606 aaKnown RBP12.4□□□□□ -0.42
SHMT2-233ENST00000557529 NXPE1Q8N323 547 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 SPATA6LQ8N4H0 392 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 ZNF366Q8N895 744 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 GBP7Q8N8V2 638 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-233ENST00000557529 SMRP1Q8NCR6 262 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 GPR26Q8NDV2 337 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 C10orf82Q8WW14 230 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 PPP1R16AQ96I34 528 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 KDM4CQ9H3R0 1056 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 NFKBIL1Q9UBC1 381 aaPredicted RBP12.4□□□□□ -0.42
SHMT2-233ENST00000557529 CD207Q9UJ71 328 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 TRMT6Q9UJA5 497 aaKnown RBP12.4□□□□□ -0.42
SHMT2-233ENST00000557529 GNPTGQ9UJJ9 305 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 PPM1HQ9ULR3 514 aa12.4□□□□□ -0.42
SHMT2-233ENST00000557529 E5RI56 91 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 ANHXE9PGG2 379 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 PSMD11O00231 422 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 ARNTLO00327 626 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 KPNA3O00505 521 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-233ENST00000557529 NPC1O15118 1278 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 OR1I1O60431 355 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 DLX3O60479 287 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 DCTN3O75935 186 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 CD1DP15813 335 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 TFEBP19484 476 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 SERPINB5P36952 375 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 HTR4Q13639 388 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 SETDB1Q15047 1291 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 CES4AQ5XG92 561 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 PTRHD1Q6GMV3 140 aaKnown RBP12.39□□□□□ -0.43
SHMT2-233ENST00000557529 PARS2Q7L3T8 475 aaKnown RBP12.39□□□□□ -0.43
SHMT2-233ENST00000557529 SLC22A9Q8IVM8 553 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 RHEBL1Q8TAI7 183 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 CSGALNACT1Q8TDX6 532 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 THOC1Q96FV9 657 aaKnown RBP12.39□□□□□ -0.43
SHMT2-233ENST00000557529 GPR21Q99679 349 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 GATA5Q9BWX5 397 aaPredicted RBP12.39□□□□□ -0.43
SHMT2-233ENST00000557529 DERL2Q9GZP9 239 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 TFB2MQ9H5Q4 396 aaKnown RBP12.39□□□□□ -0.43
SHMT2-233ENST00000557529 KCNK4Q9NYG8 393 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 FAM50BQ9Y247 325 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 MED16Q9Y2X0 877 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 NUMBLQ9Y6R0 609 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 KIAA1549LQ6ZVL6 1849 aa12.39□□□□□ -0.43
SHMT2-233ENST00000557529 COL4A3Q01955 1670 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 C1QTNF3-AMACRE9PGA6 284 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 SMIM24O75264 130 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 NIPSNAP2O75323 286 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 HSPA4LO95757 839 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 HLA-EP13747 358 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 HNRNPLP14866 589 aaKnown RBP eCLIP12.38□□□□□ -0.43
SHMT2-233ENST00000557529 UGT1A6P19224 532 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 CHRM3P20309 590 aa12.38□□□□□ -0.43
SHMT2-233ENST00000557529 UGT1A1P22309 533 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms