RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 M0QZ92 97 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 RANBP6O60518 1105 aaKnown RBP4.02□□□□□ -1.77
CHD8-212ENST00000557329 FAM155BO75949 473 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 METTL18O95568 372 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 GGPS1O95749 300 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 CYP4B1P13584 511 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 CD72P21854 359 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 PRKCHP24723 683 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 MARK3P27448 753 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 TKTP29401 623 aaKnown RBP4.02□□□□□ -1.77
CHD8-212ENST00000557329 CCKARP32238 428 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 PBX3P40426 434 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 SKIV2L2P42285 1042 aaKnown RBP4.02□□□□□ -1.77
CHD8-212ENST00000557329 RFX2P48378 723 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 FAM3BP58499 235 aaPredicted RBP4.02□□□□□ -1.77
CHD8-212ENST00000557329 THOC5Q13769 683 aaKnown RBP4.02□□□□□ -1.77
CHD8-212ENST00000557329 SEMA3AQ14563 771 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 CCDC6Q16204 474 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 HSDL1Q3SXM5 330 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 GALNTL6Q49A17 601 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 GXYLT1Q4G148 440 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 ANKRD45Q5TZF3 282 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 SLC30A9Q6PML9 568 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.02□□□□□ -1.77
CHD8-212ENST00000557329 GMCL1P1Q8NEA9 526 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 PPTC7Q8NI37 304 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 SCAMP5Q8TAC9 235 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 GABPB2Q8TAK5 448 aaPredicted RBP4.02□□□□□ -1.77
CHD8-212ENST00000557329 TMEM163Q8TC26 289 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 MORC4Q8TE76 937 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 ATP8B4Q8TF62 1192 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 HDAC7Q8WUI4 952 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 DNAJB3Q8WWF6 145 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 NCSTNQ92542 709 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 MSI2Q96DH6 328 aaKnown RBP4.02□□□□□ -1.77
CHD8-212ENST00000557329 TAAR1Q96RJ0 339 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 RPS6KC1Q96S38 1066 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 MAGEH1Q9H213 219 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 CATSPERBQ9H7T0 1116 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 VAT1LQ9HCJ6 419 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 ARL15Q9NXU5 204 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 IL36RNQ9UBH0 155 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 DUSP12Q9UNI6 340 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 SCN10AQ9Y5Y9 1956 aa4.02□□□□□ -1.77
CHD8-212ENST00000557329 BAZ2AQ9UIF9 1905 aaKnown RBP4.01□□□□□ -1.77
CHD8-212ENST00000557329 AGAP5A6NIR3 686 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 SRRM3A6NNA2 597 aaPredicted RBP4.01□□□□□ -1.77
CHD8-212ENST00000557329 E7EVH7 732 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 SLC30A4O14863 429 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 CHRNA1P02708 482 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 FGF2P09038 288 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 CBSLP0DN79 551 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 SCG2P13521 617 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 ENO3P13929 434 aaPredicted RBP4.01□□□□□ -1.77
CHD8-212ENST00000557329 ARSBP15848 533 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 CHN1P15882 459 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 EPCAMP16422 314 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 PRPH2P23942 346 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 KLRC2P26717 231 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 HOXD3P31249 432 aaPredicted RBP4.01□□□□□ -1.77
CHD8-212ENST00000557329 CBSP35520 551 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 MLH1P40692 756 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 THBS3P49746 956 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 METAP2P50579 478 aaKnown RBP eCLIP4.01□□□□□ -1.77
CHD8-212ENST00000557329 PAPOLAP51003 745 aaKnown RBP4.01□□□□□ -1.77
CHD8-212ENST00000557329 P2RX3P56373 397 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 ZP1P60852 638 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 UBE3AQ05086 875 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 EGR4Q05215 589 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 SIM2Q14190 667 aaPredicted RBP4.01□□□□□ -1.77
CHD8-212ENST00000557329 SMC1AQ14683 1233 aaKnown RBP4.01□□□□□ -1.77
CHD8-212ENST00000557329 LPIN1Q14693 890 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 TMEM266Q2M3C6 531 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 RUNDC3AQ59EK9 446 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 COLGALT1Q8NBJ5 622 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 CLEC4CQ8WTT0 213 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 CCT6BQ92526 530 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 MRPS27Q92552 414 aaKnown RBP4.01□□□□□ -1.77
CHD8-212ENST00000557329 GOLGA1Q92805 767 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 EME1Q96AY2 570 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 ZNF689Q96CS4 500 aaPredicted RBP4.01□□□□□ -1.77
CHD8-212ENST00000557329 TWSG1Q9GZX9 223 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 ISCUQ9H1K1 167 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 MYLK2Q9H1R3 596 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 AAMDCQ9H7C9 122 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 MRPL44Q9H9J2 332 aaKnown RBP4.01□□□□□ -1.77
CHD8-212ENST00000557329 NOD2Q9HC29 1040 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 RASSF1Q9NS23 344 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 SIRT3Q9NTG7 399 aaPredicted RBP4.01□□□□□ -1.77
CHD8-212ENST00000557329 PAG1Q9NWQ8 432 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 ZDHHC7Q9NXF8 308 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 DHDHQ9UQ10 334 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 EXOC6BQ9Y2D4 811 aa4.01□□□□□ -1.77
CHD8-212ENST00000557329 ATG2AQ2TAZ0 1938 aa4□□□□□ -1.77
CHD8-212ENST00000557329 MYH4Q9Y623 1939 aa4□□□□□ -1.77
CHD8-212ENST00000557329 CHD6Q8TD26 2715 aa4□□□□□ -1.77
CHD8-212ENST00000557329 WDR87Q6ZQQ6 2873 aa4□□□□□ -1.77
CHD8-212ENST00000557329 TRBV5-7A0A0A0MS05 114 aa4□□□□□ -1.77
CHD8-212ENST00000557329 CXorf65A6NEN9 183 aa4□□□□□ -1.77
CHD8-212ENST00000557329 OR6C75A6NL08 312 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms