RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 RGSL1A5PLK6 1076 aa15.76■□□□□ 0.11
TUBB3-213ENST00000557262 ATP1A1P05023 1023 aaKnown RBP15.76■□□□□ 0.11
TUBB3-213ENST00000557262 TPM3P06753 285 aa15.76■□□□□ 0.11
TUBB3-213ENST00000557262 CSTF2P33240 577 aaKnown RBP eCLIP15.76■□□□□ 0.11
TUBB3-213ENST00000557262 MAN1A1P33908 653 aa15.76■□□□□ 0.11
TUBB3-213ENST00000557262 QPCTQ16769 361 aa15.76■□□□□ 0.11
TUBB3-213ENST00000557262 CHST15Q7LFX5 561 aaPredicted RBP15.76■□□□□ 0.11
TUBB3-213ENST00000557262 VASH2Q86V25 355 aa15.76■□□□□ 0.11
TUBB3-213ENST00000557262 SFRP1Q8N474 314 aa15.76■□□□□ 0.11
TUBB3-213ENST00000557262 CCDC112Q8NEF3 446 aa15.76■□□□□ 0.11
TUBB3-213ENST00000557262 SLC37A2Q8TED4 501 aa15.76■□□□□ 0.11
TUBB3-213ENST00000557262 RAPGEF5Q92565 580 aa15.76■□□□□ 0.11
TUBB3-213ENST00000557262 AHCYL2Q96HN2 611 aaKnown RBP15.76■□□□□ 0.11
TUBB3-213ENST00000557262 ZNF830Q96NB3 372 aaPredicted RBP15.76■□□□□ 0.11
TUBB3-213ENST00000557262 SLC38A3Q99624 504 aa15.76■□□□□ 0.11
TUBB3-213ENST00000557262 ARHGAP9Q9BRR9 750 aa15.76■□□□□ 0.11
TUBB3-213ENST00000557262 ADGRE3Q9BY15 652 aa15.76■□□□□ 0.11
TUBB3-213ENST00000557262 RMI1Q9H9A7 625 aa15.76■□□□□ 0.11
TUBB3-213ENST00000557262 OAS3Q9Y6K5 1087 aaKnown RBP15.76■□□□□ 0.11
TUBB3-213ENST00000557262 STMND1H3BQB6 276 aa15.75■□□□□ 0.11
TUBB3-213ENST00000557262 KCNK1O00180 336 aa15.75■□□□□ 0.11
TUBB3-213ENST00000557262 MMP2P08253 660 aa15.75■□□□□ 0.11
TUBB3-213ENST00000557262 THRAP10827 490 aa15.75■□□□□ 0.11
TUBB3-213ENST00000557262 MPSTP25325 297 aa15.75■□□□□ 0.11
TUBB3-213ENST00000557262 CD86P42081 329 aa15.75■□□□□ 0.11
TUBB3-213ENST00000557262 IFI35P80217 286 aaPredicted RBP15.75■□□□□ 0.11
TUBB3-213ENST00000557262 PPIDQ08752 370 aaKnown RBP15.75■□□□□ 0.11
TUBB3-213ENST00000557262 MESDQ14696 234 aa15.75■□□□□ 0.11
TUBB3-213ENST00000557262 ASTE1Q2TB18 679 aaPredicted RBP15.75■□□□□ 0.11
TUBB3-213ENST00000557262 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.75■□□□□ 0.11
TUBB3-213ENST00000557262 HENMT1Q5T8I9 393 aaKnown RBP15.75■□□□□ 0.11
TUBB3-213ENST00000557262 IYDQ6PHW0 289 aa15.75■□□□□ 0.11
TUBB3-213ENST00000557262 CNTD1Q8N815 330 aa15.75■□□□□ 0.11
TUBB3-213ENST00000557262 OR8K1Q8NGG5 319 aa15.75■□□□□ 0.11
TUBB3-213ENST00000557262 OR10G6Q8NH81 332 aa15.75■□□□□ 0.11
TUBB3-213ENST00000557262 EXTL1Q92935 676 aa15.75■□□□□ 0.11
TUBB3-213ENST00000557262 NKD1Q969G9 470 aa15.75■□□□□ 0.11
TUBB3-213ENST00000557262 SH3KBP1Q96B97 665 aa15.75■□□□□ 0.11
TUBB3-213ENST00000557262 XPO4Q9C0E2 1151 aaKnown RBP15.75■□□□□ 0.11
TUBB3-213ENST00000557262 SARS2Q9NP81 518 aaKnown RBP15.75■□□□□ 0.11
TUBB3-213ENST00000557262 PDP2Q9P2J9 529 aa15.75■□□□□ 0.11
TUBB3-213ENST00000557262 PRKAB1Q9Y478 270 aa15.75■□□□□ 0.11
TUBB3-213ENST00000557262 PCDHGA4Q9Y5G9 962 aa15.75■□□□□ 0.11
TUBB3-213ENST00000557262 SSU72P8A0A1W2PR75 194 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 LRRD1A4D1F6 860 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 FADS2P1A8MWK0 482 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 ZNF487B1APH4 448 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 EML2O95834 649 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 TMEM253P0C7T8 217 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 CSF2RBP32927 897 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 PPM1FP49593 454 aaPredicted RBP15.74■□□□□ 0.11
TUBB3-213ENST00000557262 ATP1A2P50993 1020 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 ARSDP51689 593 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 HHEXQ03014 270 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 ZNF761Q86XN6 746 aaPredicted RBP15.74■□□□□ 0.11
TUBB3-213ENST00000557262 PLD5Q8N7P1 536 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 SLC35G2Q8TBE7 412 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 JPH3Q8WXH2 748 aaPredicted RBP15.74■□□□□ 0.11
TUBB3-213ENST00000557262 ART4Q93070 314 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 DDA1Q9BW61 102 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 MAK16Q9BXY0 300 aaKnown RBP15.74■□□□□ 0.11
TUBB3-213ENST00000557262 ASPSCR1Q9BZE9 553 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 DEF6Q9H4E7 631 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 ZNHIT6Q9NWK9 470 aaKnown RBP15.74■□□□□ 0.11
TUBB3-213ENST00000557262 OCIAD1Q9NX40 245 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 SLC39A1Q9NY26 324 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 TMEM9Q9P0T7 183 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 TBC1D29Q9UFV1 150 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 HEY1Q9Y5J3 304 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 PCYT1BQ9Y5K3 369 aaPredicted RBP15.74■□□□□ 0.11
TUBB3-213ENST00000557262 B3GALT1Q9Y5Z6 326 aa15.74■□□□□ 0.11
TUBB3-213ENST00000557262 FLNBO75369 2602 aaKnown RBP15.73■□□□□ 0.11
TUBB3-213ENST00000557262 B4E171 279 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 DUX1O43812 170 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 AKR1B10O60218 316 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 NUAK1O60285 661 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 SFTPCP11686 197 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 SLC2A4P14672 509 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 WT1P19544 449 aaPredicted RBP15.73■□□□□ 0.11
TUBB3-213ENST00000557262 TSPAN7P41732 249 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 ARHGAP25P42331 645 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 AP1B1Q10567 949 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 ZBTB17Q13105 803 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 WDR74Q6RFH5 385 aaPredicted RBP15.73■□□□□ 0.11
TUBB3-213ENST00000557262 LYSMD3Q7Z3D4 306 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 SLC9B2Q86UD5 537 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 NT5DC3Q86UY8 548 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 VSIG1Q86XK7 387 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.73■□□□□ 0.11
TUBB3-213ENST00000557262 DNAJC7Q99615 494 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 HERPUD2Q9BSE4 406 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 CARD9Q9H257 536 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 STN1Q9H668 368 aaKnown RBP15.73■□□□□ 0.11
TUBB3-213ENST00000557262 ZFYVE1Q9HBF4 777 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 KCNK6Q9Y257 313 aa15.73■□□□□ 0.11
TUBB3-213ENST00000557262 SETXQ7Z333 2677 aaKnown RBP15.72■□□□□ 0.11
TUBB3-213ENST00000557262 BOD1L1Q8NFC6 3051 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 C3orf70A6NLC5 250 aaPredicted RBP15.72■□□□□ 0.11
TUBB3-213ENST00000557262 OR5K4A6NMS3 321 aa15.72■□□□□ 0.11
TUBB3-213ENST00000557262 EFCAB7A8K855 629 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms