RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 PBX1P40424 430 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 SEPHS1P49903 392 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 PHC1P78364 1004 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 ILKQ13418 452 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 CYTH1Q15438 398 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 SMAD1Q15797 465 aaKnown RBP9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 SEL1L3Q68CR1 1132 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 LEKR1Q6ZMV7 388 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 Q6ZSR6 202 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 PARS2Q7L3T8 475 aaKnown RBP9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 KANSL1Q7Z3B3 1105 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 TTC7BQ86TV6 843 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 LUZP1Q86V48 1076 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 VPS36Q86VN1 386 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 TMPRSS12Q86WS5 348 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 ARFGAP1Q8N6T3 406 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 VOPP1Q96AW1 172 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 HMCESQ96FZ2 354 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 BMFQ96LC9 184 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 TEKT5Q96M29 485 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 Q96M66 194 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 KLHL32Q96NJ5 620 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 TAAR9Q96RI9 348 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 DHX35Q9H5Z1 703 aaKnown RBP9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 DKK3Q9UBP4 350 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 PCSK1NQ9UHG2 260 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 CBLCQ9ULV8 474 aa9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 KMT2BQ9UMN6 2715 aaPredicted RBP9.91□□□□□ -0.82
HNRNPC-228ENST00000557033 PTPRBP23467 1997 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 CABIN1Q9Y6J0 2220 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 NEMP2A6NFY4 417 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 ARHGAP42A6NI28 874 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 A6NNZ2 444 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 FAM47E-STBD1D6RA91 191 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 EEF2KO00418 725 aaKnown RBP9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 TOR1BO14657 336 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 FPGTO14772 594 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 AREL1O15033 823 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 DAPK3O43293 454 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 SERPING1P05155 500 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 UGT2B4P06133 528 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 CKMT2P17540 419 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 MIPP30301 263 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 GKP32189 559 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 RABIFP47224 123 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 RHOAP61586 193 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 ZBED6P86452 979 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 FGL2Q14314 439 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 PIGHQ14442 188 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 BOLA3Q53S33 107 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 ATXN7L2Q5T6C5 722 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 ANKRD34AQ69YU3 496 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 CRTC3Q6UUV7 619 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 KYAT3Q6YP21 454 aaKnown RBP9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 GCNT7Q6ZNI0 430 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 RFX8Q6ZV50 586 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 DNAAF5Q86Y56 855 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 SLC25A45Q8N413 288 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 CISD2Q8N5K1 135 aaKnown RBP9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 LZTR1Q8N653 840 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 OR6K2Q8NGY2 324 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 ZCCHC14Q8WYQ9 949 aaKnown RBP9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 ZNF653Q96CK0 615 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 ZNF641Q96N77 438 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 SNRNP25Q9BV90 132 aaKnown RBP9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 SLC39A8Q9C0K1 460 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 KLC2Q9H0B6 622 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 PDFQ9HBH1 243 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 UBA2Q9UBT2 640 aaPredicted RBP9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 CAPN11Q9UMQ6 739 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 CA5BQ9Y2D0 317 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 SPO11Q9Y5K1 396 aa9.9□□□□□ -0.82
HNRNPC-228ENST00000557033 PLXNB3Q9ULL4 1909 aa9.9□□□□□ -0.83
HNRNPC-228ENST00000557033 KNL1Q8NG31 2342 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 TRPM6Q9BX84 2022 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 IGLON5A6NGN9 336 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 SRRM3A6NNA2 597 aaPredicted RBP9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 OIP5O43482 229 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 PRAMEF11O60813 436 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 LRCH4O75427 683 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 ERCC2P18074 760 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 DGKAP23743 735 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 ACP1P24666 158 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 LSP1P33241 339 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 CSNK1DP48730 415 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 PAPOLAP51003 745 aaKnown RBP9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 CLDN2P57739 230 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 HNRNPKP61978 463 aaKnown RBP eCLIP9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 IL10RBQ08334 325 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 NSUN2Q08J23 767 aaKnown RBP eCLIP9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 ELP6Q0PNE2 266 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 RFTN1Q14699 578 aaPredicted RBP9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 CA9Q16790 459 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 HS1BP3Q53T59 392 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 AFMIDQ63HM1 303 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 DHRS13Q6UX07 377 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 DENND6BQ8NEG7 585 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 CENPTQ96BT3 561 aa9.89□□□□□ -0.83
HNRNPC-228ENST00000557033 TUBGCP5Q96RT8 1024 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms