RNA–Protein interactions for RNA: ENST00000556916.5

FOXN3-213, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-213ENST00000556916 C1orf228Q6PIY5 440 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 IZUMO2Q6UXV1 221 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 CATSPERGQ6ZRH7 1159 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 PIK3AP1Q6ZUJ8 805 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 NLRP9Q7RTR0 991 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 ZBED8Q8IZ13 594 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 MYOCDQ8IZQ8 938 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 BLIDQ8IZY5 108 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 NUP93Q8N1F7 819 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 BBS5Q8N3I7 341 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 GALNT16Q8N428 558 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 SAMD3Q8N6K7 520 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 UBL4BQ8N7F7 174 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 FAM133AQ8N9E0 248 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 BBOF1Q8ND07 529 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 RP9Q8TA86 221 aaKnown RBP3.85□□□□□ -1.79
FOXN3-213ENST00000556916 CCDC110Q8TBZ0 833 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 FNDC8Q8TC99 324 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 MORC4Q8TE76 937 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 TRPC4APQ8TEL6 797 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 IP6K1Q92551 441 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 VPS50Q96JG6 964 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 C5orf34Q96MH7 638 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 TTC25Q96NG3 672 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 HNRNPABQ99729 332 aaKnown RBP3.85□□□□□ -1.79
FOXN3-213ENST00000556916 DDX50Q9BQ39 737 aaKnown RBP3.85□□□□□ -1.79
FOXN3-213ENST00000556916 THAP7Q9BT49 309 aaPredicted RBP3.85□□□□□ -1.79
FOXN3-213ENST00000556916 VN1R3Q9BXE9 311 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 CADM1Q9BY67 442 aaKnown RBP3.85□□□□□ -1.79
FOXN3-213ENST00000556916 TRIM9Q9C026 710 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 PLGRKTQ9HBL7 147 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 NDE1Q9NXR1 346 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 PLK2Q9NYY3 685 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 GRHL1Q9NZI5 618 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 SENP1Q9P0U3 644 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 VPS51Q9UID3 782 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 MTUS1Q9ULD2 1270 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 RIMKLBQ9ULI2 386 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 USP22Q9UPT9 525 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 TRAF3IP3Q9Y228 551 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 ZNF711Q9Y462 761 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 FADS3Q9Y5Q0 445 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 SLC4A4Q9Y6R1 1079 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 FOCADQ5VW36 1801 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 ZNF532Q9HCE3 1301 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 C10orf71Q711Q0 1435 aa3.85□□□□□ -1.79
FOXN3-213ENST00000556916 LRP5O75197 1615 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 PAPPAQ13219 1627 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 RGPD3A6NKT7 1758 aaPredicted RBP3.84□□□□□ -1.79
FOXN3-213ENST00000556916 RGPD4Q7Z3J3 1758 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 TAF1P21675 1872 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 NAV1Q8NEY1 1877 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 CCDC194A0A1B0GVG4 234 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 APOL1O14791 398 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 PRPF4O43172 522 aaKnown RBP eCLIP3.84□□□□□ -1.792e-6■■■□□ 15.8
FOXN3-213ENST00000556916 SPAG7O75391 227 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 PRDM1O75626 825 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 TTC4O95801 387 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 NDST3O95803 873 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 SCG2P13521 617 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 ETS2P15036 469 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 RPL17P18621 184 aaKnown RBP3.84□□□□□ -1.79
FOXN3-213ENST00000556916 MUTP22033 750 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 TNFSF4P23510 183 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 CTNNA2P26232 953 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 EPHA3P29320 983 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 ATICP31939 592 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 FOXN2P32314 431 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 MAN1A1P33908 653 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 PGM1P36871 562 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 CETN2P41208 172 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 GATMP50440 423 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 HADHBP55084 474 aaKnown RBP3.84□□□□□ -1.79
FOXN3-213ENST00000556916 HDAC4P56524 1084 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 GEMIN4P57678 1058 aaKnown RBP3.84□□□□□ -1.79
FOXN3-213ENST00000556916 PPATQ06203 517 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 ORC2Q13416 577 aaPredicted RBP3.84□□□□□ -1.79
FOXN3-213ENST00000556916 PMS2P11Q13670 270 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 THOC5Q13769 683 aaKnown RBP3.84□□□□□ -1.79
FOXN3-213ENST00000556916 PDK4Q16654 411 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 PFKFB3Q16875 520 aaPredicted RBP3.84□□□□□ -1.79
FOXN3-213ENST00000556916 ZNF260Q3ZCT1 412 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 ZC2HC1CQ53FD0 456 aaPredicted RBP3.84□□□□□ -1.79
FOXN3-213ENST00000556916 AWAT1Q58HT5 328 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 FAM209BQ5JX69 171 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 MFSD4BQ5TF39 518 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 TMEM53Q6P2H8 277 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 LRRC8BQ6P9F7 803 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 RFWD3Q6PCD5 774 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 CCDC137Q6PK04 289 aaKnown RBP3.84□□□□□ -1.79
FOXN3-213ENST00000556916 CRTC1Q6UUV9 634 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 CLEC9AQ6UXN8 241 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 DSTYKQ6XUX3 929 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 TRIM72Q6ZMU5 477 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 FAM47EQ6ZV65 393 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 OTUD6AQ7L8S5 288 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 IRF2BP2Q7Z5L9 587 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 PATL1Q86TB9 770 aaKnown RBP3.84□□□□□ -1.79
FOXN3-213ENST00000556916 CCDC25Q86WR0 208 aa3.84□□□□□ -1.79
FOXN3-213ENST00000556916 LRRC6Q86X45 466 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms