RNA–Protein interactions for RNA: ENST00000556700.5

NUMB-222, Transcript of NUMB, endocytic adaptor protein, human

TSL 4

Gene NUMB, Length 529 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUMB-222	ENST00000556700	TRAFD1	O14545	582 aa	Predicted RBP	11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	HTRA2	O43464	458 aa	Predicted RBP	11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	B4GAT1	O43505	415 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	STK10	O94804	968 aa	Known RBP	11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	PGLS	O95336	258 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	JCHAIN	P01591	159 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	HLA-DQB2	P05538	268 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	ALPI	P09923	528 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	ELFN1	P0C7U0	828 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	MMP12	P39900	470 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	ATP5O	P48047	213 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	BLK	P51451	505 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	RPL26	P61254	145 aa	Known RBP	11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	SLC10A2	Q12908	348 aa	Predicted RBP	11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	XRCC4	Q13426	336 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	ARHGEF7	Q14155	803 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	ELOC	Q15369	112 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	TCEA2	Q15560	299 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	SKIDA1	Q1XH10	827 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	LRRC73	Q5JTD7	316 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	NPNT	Q6UXI9	565 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	DPPA4	Q7L190	304 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	HID1	Q8IV36	788 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700		Q8N9G6	341 aa	Predicted RBP	11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	OR6C4	Q8NGE1	309 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	ATL2	Q8NHH9	583 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	TMEM159	Q96B96	161 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	LRRC45	Q96CN5	670 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	WRAP53	Q9BUR4	548 aa	Known RBP	11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	B3GNT4	Q9C0J1	378 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	SEMA6C	Q9H3T2	930 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	TRIM10	Q9UDY6	481 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	RPL26L1	Q9UNX3	145 aa	Known RBP	11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	MAN2B2	Q9Y2E5	1009 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	PCDHGC4	Q9Y5F7	938 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	CAPN6	Q9Y6Q1	641 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	RNF215	Q9Y6U7	377 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	UNC79	Q9P2D8	2635 aa		11.45	□□□□□ -0.58
NUMB-222	ENST00000556700	PSMD11	O00231	422 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	FTCD	O95954	541 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	CCL4	P13236	92 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	PNLIP	P16233	465 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	GLB1	P16278	677 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	VIPR1	P32241	457 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	SRP54	P61011	504 aa	Known RBP	11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	CCZ1B	P86790	482 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	CCZ1	P86791	482 aa	Predicted RBP	11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	B4GALNT1	Q00973	533 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	DSC2	Q02487	901 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	TRAF2	Q12933	501 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	C16orf72	Q14CZ0	275 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	PRKD1	Q15139	912 aa	Predicted RBP	11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	IRF4	Q15306	451 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	SLC14A2	Q15849	920 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	CERCAM	Q5T4B2	595 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	CCDC70	Q6NSX1	233 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	ENPP7	Q6UWV6	458 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	RD3	Q7Z3Z2	195 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	SPRED1	Q7Z699	444 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	CCNJL	Q8IV13	435 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	ZSCAN1	Q8NBB4	408 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	TRIM58	Q8NG06	486 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	SCG3	Q8WXD2	468 aa	Known RBP	11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	NKD1	Q969G9	470 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	QKI	Q96PU8	341 aa	Known RBP eCLIP	11.44	□□□□□ -0.58	2e-6	■■■■□ 22.3
NUMB-222	ENST00000556700	RBM15	Q96T37	977 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	APOO	Q9BUR5	198 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	HEMGN	Q9BXL5	484 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	TDRD1	Q9BXT4	1180 aa	Known RBP	11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	ADGRE3	Q9BY15	652 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	ADNP	Q9H2P0	1102 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	LZTFL1	Q9NQ48	299 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	KLHL8	Q9P2G9	620 aa	Predicted RBP	11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	COQ6	Q9Y2Z9	468 aa		11.44	□□□□□ -0.58
NUMB-222	ENST00000556700	ICE1	Q9Y2F5	2266 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	TTC24	A2A3L6	582 aa	Predicted RBP	11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	ZSCAN12	O43309	604 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	RASGRP1	O95267	797 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	CTSE	P14091	401 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	PECAM1	P16284	738 aa	Predicted RBP	11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	MSN	P26038	577 aa	Known RBP	11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	CD82	P27701	267 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	CD86	P42081	329 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	LIG3	P49916	1009 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	MAPK10	P53779	464 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	ZBTB17	Q13105	803 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	HLTF	Q14527	1009 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	INPP5A	Q14642	412 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	NFATC4	Q14934	902 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	LRRC14	Q15048	493 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	NOMO1	Q15155	1222 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	LLGL1	Q15334	1064 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	TEX44	Q53QW1	395 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	ITPRIPL1	Q6GPH6	555 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	ZC3H18	Q86VM9	953 aa	Known RBP	11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	ZSWIM9	Q86XI8	627 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	GKN2	Q86XP6	184 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	JPH3	Q8WXH2	748 aa	Predicted RBP	11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	PMEPA1	Q969W9	287 aa		11.43	□□□□□ -0.58
NUMB-222	ENST00000556700	HES6	Q96HZ4	224 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms