RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 CHST15Q7LFX5 561 aaPredicted RBP22.42■■□□□ 1.18
ACTN1-220ENST00000556433 OR4D9Q8NGE8 314 aa22.42■■□□□ 1.18
ACTN1-220ENST00000556433 CHP1Q99653 195 aa22.42■■□□□ 1.18
ACTN1-220ENST00000556433 B3GNT4Q9C0J1 378 aa22.42■■□□□ 1.18
ACTN1-220ENST00000556433 VPS18Q9P253 973 aa22.42■■□□□ 1.18
ACTN1-220ENST00000556433 PCYT1BQ9Y5K3 369 aaPredicted RBP22.42■■□□□ 1.18
ACTN1-220ENST00000556433 OAS3Q9Y6K5 1087 aaKnown RBP22.42■■□□□ 1.18
ACTN1-220ENST00000556433 GCN1Q92616 2671 aaKnown RBP22.42■■□□□ 1.18
ACTN1-220ENST00000556433 KALRNO60229 2985 aa22.41■■□□□ 1.18
ACTN1-220ENST00000556433 RGSL1A5PLK6 1076 aa22.41■■□□□ 1.18
ACTN1-220ENST00000556433 APOL1O14791 398 aa22.41■■□□□ 1.18
ACTN1-220ENST00000556433 DNAJC6O75061 913 aa22.41■■□□□ 1.18
ACTN1-220ENST00000556433 MPSTP25325 297 aa22.41■■□□□ 1.18
ACTN1-220ENST00000556433 CD82P27701 267 aa22.41■■□□□ 1.18
ACTN1-220ENST00000556433 ARHGAP25P42331 645 aa22.41■■□□□ 1.18
ACTN1-220ENST00000556433 AP1B1Q10567 949 aa22.41■■□□□ 1.18
ACTN1-220ENST00000556433 TRA2AQ13595 282 aaKnown RBP eCLIP22.41■■□□□ 1.18
ACTN1-220ENST00000556433 FAM182AQ5T1J6 154 aa22.41■■□□□ 1.18
ACTN1-220ENST00000556433 HENMT1Q5T8I9 393 aaKnown RBP22.41■■□□□ 1.18
ACTN1-220ENST00000556433 SLC37A2Q8TED4 501 aa22.41■■□□□ 1.18
ACTN1-220ENST00000556433 SGF29Q96ES7 293 aa22.41■■□□□ 1.18
ACTN1-220ENST00000556433 CCDC42Q96M95 316 aa22.41■■□□□ 1.18
ACTN1-220ENST00000556433 SLC38A3Q99624 504 aa22.41■■□□□ 1.18
ACTN1-220ENST00000556433 DPYSL5Q9BPU6 564 aa22.41■■□□□ 1.18
ACTN1-220ENST00000556433 C3orf70A6NLC5 250 aaPredicted RBP22.4■■□□□ 1.18
ACTN1-220ENST00000556433 FADS2P1A8MWK0 482 aa22.4■■□□□ 1.18
ACTN1-220ENST00000556433 ZNF487B1APH4 448 aa22.4■■□□□ 1.18
ACTN1-220ENST00000556433 EML2O95834 649 aa22.4■■□□□ 1.18
ACTN1-220ENST00000556433 TPM1P09493 284 aa22.4■■□□□ 1.18
ACTN1-220ENST00000556433 FGF3P11487 239 aaPredicted RBP22.4■■□□□ 1.18
ACTN1-220ENST00000556433 FASLGP48023 281 aa22.4■■□□□ 1.18
ACTN1-220ENST00000556433 PPM1FP49593 454 aaPredicted RBP22.4■■□□□ 1.18
ACTN1-220ENST00000556433 GALNT3Q14435 633 aa22.4■■□□□ 1.18
ACTN1-220ENST00000556433 PDK1Q15118 436 aa22.4■■□□□ 1.18
ACTN1-220ENST00000556433 SLC9A4Q6AI14 798 aa22.4■■□□□ 1.18
ACTN1-220ENST00000556433 KDELC2Q7Z4H8 507 aa22.4■■□□□ 1.18
ACTN1-220ENST00000556433 VASH2Q86V25 355 aa22.4■■□□□ 1.18
ACTN1-220ENST00000556433 ZNF761Q86XN6 746 aaPredicted RBP22.4■■□□□ 1.18
ACTN1-220ENST00000556433 DTX1Q86Y01 620 aa22.4■■□□□ 1.18
ACTN1-220ENST00000556433 SFRP1Q8N474 314 aa22.4■■□□□ 1.18
ACTN1-220ENST00000556433 MED8Q96G25 268 aa22.4■■□□□ 1.18
ACTN1-220ENST00000556433 AHCYL2Q96HN2 611 aaKnown RBP22.4■■□□□ 1.18
ACTN1-220ENST00000556433 TAAR9Q96RI9 348 aa22.4■■□□□ 1.18
ACTN1-220ENST00000556433 CEP41Q9BYV8 373 aa22.4■■□□□ 1.18
ACTN1-220ENST00000556433 NHEJ1Q9H9Q4 299 aaPredicted RBP22.4■■□□□ 1.18
ACTN1-220ENST00000556433 SPTLC3Q9NUV7 552 aa22.4■■□□□ 1.18
ACTN1-220ENST00000556433 HELZ2Q9BYK8 2649 aaKnown RBP22.4■■□□□ 1.18
ACTN1-220ENST00000556433 CSF2RBP32927 897 aa22.39■■□□□ 1.17
ACTN1-220ENST00000556433 CSTF2P33240 577 aaKnown RBP eCLIP22.39■■□□□ 1.17
ACTN1-220ENST00000556433 GPLD1P80108 840 aa22.39■■□□□ 1.17
ACTN1-220ENST00000556433 ODF2Q5BJF6 829 aa22.39■■□□□ 1.17
ACTN1-220ENST00000556433 TMEM71Q6P5X7 295 aa22.39■■□□□ 1.17
ACTN1-220ENST00000556433 NPNTQ6UXI9 565 aa22.39■■□□□ 1.17
ACTN1-220ENST00000556433 LYSMD3Q7Z3D4 306 aa22.39■■□□□ 1.17
ACTN1-220ENST00000556433 VSIG1Q86XK7 387 aa22.39■■□□□ 1.17
ACTN1-220ENST00000556433 RFX6Q8HWS3 928 aa22.39■■□□□ 1.17
ACTN1-220ENST00000556433 RHOT2Q8IXI1 618 aa22.39■■□□□ 1.17
ACTN1-220ENST00000556433 AGBL5Q8NDL9 886 aa22.39■■□□□ 1.17
ACTN1-220ENST00000556433 RNF25Q96BH1 459 aaPredicted RBP22.39■■□□□ 1.17
ACTN1-220ENST00000556433 AGAP3Q96P47 875 aa22.39■■□□□ 1.17
ACTN1-220ENST00000556433 ZMYND15Q9H091 742 aa22.39■■□□□ 1.17
ACTN1-220ENST00000556433 RMI1Q9H9A7 625 aa22.39■■□□□ 1.17
ACTN1-220ENST00000556433 ZFYVE1Q9HBF4 777 aa22.39■■□□□ 1.17
ACTN1-220ENST00000556433 ABHD10Q9NUJ1 306 aa22.39■■□□□ 1.17
ACTN1-220ENST00000556433 TMEM9Q9P0T7 183 aa22.39■■□□□ 1.17
ACTN1-220ENST00000556433 TBC1D29Q9UFV1 150 aa22.39■■□□□ 1.17
ACTN1-220ENST00000556433 KCNK6Q9Y257 313 aa22.39■■□□□ 1.17
ACTN1-220ENST00000556433 ZNF462Q96JM2 2506 aa22.38■■□□□ 1.17
ACTN1-220ENST00000556433 COL6A6A6NMZ7 2263 aa22.38■■□□□ 1.17
ACTN1-220ENST00000556433 ZIC2O95409 532 aaPredicted RBP22.38■■□□□ 1.17
ACTN1-220ENST00000556433 KRT1P04264 644 aa22.38■■□□□ 1.17
ACTN1-220ENST00000556433 THRAP10827 490 aa22.38■■□□□ 1.17
ACTN1-220ENST00000556433 ACP5P13686 325 aa22.38■■□□□ 1.17
ACTN1-220ENST00000556433 ZFXP17010 805 aaPredicted RBP22.38■■□□□ 1.17
ACTN1-220ENST00000556433 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.38■■□□□ 1.17
ACTN1-220ENST00000556433 NT5DC3Q86UY8 548 aa22.38■■□□□ 1.17
ACTN1-220ENST00000556433 VSTM4Q8IW00 320 aa22.38■■□□□ 1.17
ACTN1-220ENST00000556433 OR10G6Q8NH81 332 aa22.38■■□□□ 1.17
ACTN1-220ENST00000556433 EID2BQ96D98 161 aa22.38■■□□□ 1.17
ACTN1-220ENST00000556433 IMP4Q96G21 291 aaKnown RBP22.38■■□□□ 1.17
ACTN1-220ENST00000556433 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.37■■□□□ 1.17
ACTN1-220ENST00000556433 PPP1R12AO14974 1030 aaPredicted RBP22.37■■□□□ 1.17
ACTN1-220ENST00000556433 SNX2O60749 519 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 MTA2O94776 668 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 PIRTP0C851 137 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 TNNT1P13805 278 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 HHEXQ03014 270 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 PCSK7Q16549 785 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 LRRC38Q5VT99 294 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 ALS2CLQ60I27 953 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 IYDQ6PHW0 289 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 B4GALNT4Q76KP1 1039 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 ZSCAN1Q8NBB4 408 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 CCDC112Q8NEF3 446 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 JPH3Q8WXH2 748 aaPredicted RBP22.37■■□□□ 1.17
ACTN1-220ENST00000556433 TRIB3Q96RU7 358 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 SPATA16Q9BXB7 569 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 SLC25A51Q9H1U9 297 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 CARD9Q9H257 536 aa22.37■■□□□ 1.17
ACTN1-220ENST00000556433 STN1Q9H668 368 aaKnown RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms