RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 C3orf20Q8ND61 904 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 CT55Q8WUE5 264 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 C9orf72Q96LT7 481 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 PSKH2Q96QS6 385 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 TUBGCP2Q9BSJ2 902 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 NAA15Q9BXJ9 866 aaKnown RBP13.8□□□□□ -0.2
ACTN1-219ENST00000556432 ACTL8Q9H568 366 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 DHX35Q9H5Z1 703 aaKnown RBP13.8□□□□□ -0.2
ACTN1-219ENST00000556432 ACSS2Q9NR19 701 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 PADI1Q9ULC6 663 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 AP4E1Q9UPM8 1137 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 SHANK1Q9Y566 2161 aa13.8□□□□□ -0.2
ACTN1-219ENST00000556432 MN1Q10571 1320 aaPredicted RBP13.8□□□□□ -0.2
ACTN1-219ENST00000556432 ZNF106Q9H2Y7 1883 aaKnown RBP13.79□□□□□ -0.2
ACTN1-219ENST00000556432 SIGLEC16A6NMB1 481 aa13.79□□□□□ -0.2
ACTN1-219ENST00000556432 LRCH4O75427 683 aa13.79□□□□□ -0.2
ACTN1-219ENST00000556432 SORBS2O94875 1100 aaKnown RBP13.79□□□□□ -0.2
ACTN1-219ENST00000556432 ATP1A1P05023 1023 aaKnown RBP13.79□□□□□ -0.2
ACTN1-219ENST00000556432 TYRP1P17643 537 aa13.79□□□□□ -0.2
ACTN1-219ENST00000556432 CHRNB2P17787 502 aa13.79□□□□□ -0.2
ACTN1-219ENST00000556432 DPTQ07507 201 aa13.79□□□□□ -0.2
ACTN1-219ENST00000556432 IL11RAQ14626 422 aa13.79□□□□□ -0.2
ACTN1-219ENST00000556432 MIIPQ5JXC2 388 aa13.79□□□□□ -0.2
ACTN1-219ENST00000556432 SCAMP4Q969E2 229 aa13.79□□□□□ -0.2
ACTN1-219ENST00000556432 CNPY3Q9BT09 278 aa13.79□□□□□ -0.2
ACTN1-219ENST00000556432 MFRPQ9BY79 579 aa13.79□□□□□ -0.2
ACTN1-219ENST00000556432 ABCG8Q9H221 673 aa13.79□□□□□ -0.2
ACTN1-219ENST00000556432 VPS16Q9H269 839 aa13.79□□□□□ -0.2
ACTN1-219ENST00000556432 NOD2Q9HC29 1040 aa13.79□□□□□ -0.2
ACTN1-219ENST00000556432 CPNE7Q9UBL6 633 aa13.79□□□□□ -0.2
ACTN1-219ENST00000556432 PCDHGA6Q9Y5G7 932 aa13.79□□□□□ -0.2
ACTN1-219ENST00000556432 KIR2DS5A0A0G2JLQ3 304 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 A0A0G2JNG1 304 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 ARGFXA6NJG6 315 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 C21orf140B9A014 251 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 KIR2DS3K7RE56 304 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 SPAG6O75602 509 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 SOD1P00441 154 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 MT-ND3P03897 115 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 PYGLP06737 847 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 F3P13726 295 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 AMD1P17707 334 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 RIPPLY3P57055 190 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 SLC10A7Q0GE19 358 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 TRAF2Q12933 501 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 PTP4A2Q12974 167 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 KIR2DS5Q14953 304 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 SYCP1Q15431 976 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 ARMC12Q5T9G4 340 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 LRRC66Q68CR7 880 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 DCUN1D2Q6PH85 259 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 RFX8Q6ZV50 586 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 TECPR1Q7Z6L1 1165 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 TICAM1Q8IUC6 712 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 PHYKPLQ8IUZ5 450 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 ARHGAP12Q8IWW6 846 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 TRIM48Q8IWZ4 208 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 NPWQ8N729 165 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 AVL9Q8NBF6 648 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 SEC14L1Q92503 715 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 SPOCK2Q92563 424 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 SCRN2Q96FV2 425 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 NUDCD1Q96RS6 583 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 RIOK2Q9BVS4 552 aaKnown RBP13.78□□□□□ -0.2
ACTN1-219ENST00000556432 OSGEPL1Q9H4B0 414 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 ERRFI1Q9UJM3 462 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-219ENST00000556432 G3BP2Q9UN86 482 aaKnown RBP13.78□□□□□ -0.2
ACTN1-219ENST00000556432 ZNF451Q9Y4E5 1061 aa13.78□□□□□ -0.2
ACTN1-219ENST00000556432 PCDHGA9Q9Y5G4 932 aaKnown RBP13.78□□□□□ -0.2
ACTN1-219ENST00000556432 LILRA5A6NI73 299 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 POLQO75417 2590 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 UBXN7O94888 489 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 PGLSO95336 258 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 ERCC2P18074 760 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 HSPA9P38646 679 aaKnown RBP13.77□□□□□ -0.21
ACTN1-219ENST00000556432 GSCP56915 257 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-219ENST00000556432 RPS18P62269 152 aaKnown RBP13.77□□□□□ -0.21
ACTN1-219ENST00000556432 RPL7AP62424 266 aaKnown RBP13.77□□□□□ -0.21
ACTN1-219ENST00000556432 CHRNA6Q15825 494 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 CA9Q16790 459 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 UGT8Q16880 541 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 PPP6R3Q5H9R7 873 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-219ENST00000556432 PPP1R3BQ86XI6 285 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 NDUFAF2Q8N183 169 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 CBARPQ8N350 705 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-219ENST00000556432 BBS5Q8N3I7 341 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 EXD1Q8NHP7 514 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 THAP4Q8WY91 577 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 TCTN2Q96GX1 697 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 C5orf34Q96MH7 638 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 PCDHB18PQ96TA0 734 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 AGAP2Q99490 1192 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 ING2Q9H160 280 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 LHX9Q9NQ69 397 aa13.77□□□□□ -0.21
ACTN1-219ENST00000556432 PCYT1BQ9Y5K3 369 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-219ENST00000556432 OR5K4A6NMS3 321 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 DPM1O60762 260 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 DNAJC6O75061 913 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 RECKO95980 971 aa13.76□□□□□ -0.21
ACTN1-219ENST00000556432 LDLRP01130 860 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms