RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 CD160O95971 181 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 CALCAP01258 141 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 UGT2B4P06133 528 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 THRAP10827 490 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 RAC2P15153 192 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 F8A1P23610 371 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 MAZP56270 477 aaKnown RBP6.87□□□□□ -1.31
ATXN3-236ENST00000556220 MC2RQ01718 297 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 LRMPQ12912 555 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 INPP5JQ15735 1006 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-236ENST00000556220 MYLK3Q32MK0 819 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 NKAIN2Q5VXU1 208 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 MCATQ8IVS2 390 aaKnown RBP6.87□□□□□ -1.31
ATXN3-236ENST00000556220 DEFB106AQ8N104 65 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 FBXO15Q8NCQ5 510 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-236ENST00000556220 OR56A4Q8NGH8 313 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 OR6K2Q8NGY2 324 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 CCL4L1Q8NHW4 92 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 KIAA1524Q8TCG1 905 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 OR1E3Q8WZA6 343 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 PDXPQ96GD0 296 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 WDR92Q96MX6 357 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 KLHL32Q96NJ5 620 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 SLC2A13Q96QE2 648 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 DPYSL5Q9BPU6 564 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 TM6SF2Q9BZW4 377 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 SIK2Q9H0K1 926 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 TMEM168Q9H0V1 697 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 CHMP5Q9NZZ3 219 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 PDP2Q9P2J9 529 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 ADAM30Q9UKF2 790 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 POLHQ9Y253 713 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 TMEM184BQ9Y519 407 aaPredicted RBP6.87□□□□□ -1.31
ATXN3-236ENST00000556220 OR1A2Q9Y585 309 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 ACTL7AQ9Y615 435 aa6.87□□□□□ -1.31
ATXN3-236ENST00000556220 MRPS18BQ9Y676 258 aaKnown RBP6.87□□□□□ -1.31
ATXN3-236ENST00000556220 MED13LQ71F56 2210 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 PDZD2O15018 2839 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 NYNRINQ9P2P1 1898 aaKnown RBP6.86□□□□□ -1.31
ATXN3-236ENST00000556220 CXorf51AA0A1B0GTR3 108 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 TMEM202A6NGA9 273 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 E5RJQ4 531 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 TNFRSF10CO14798 259 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 STK17BO94768 372 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 SORBS2O94875 1100 aaKnown RBP6.86□□□□□ -1.31
ATXN3-236ENST00000556220 FGF1P05230 155 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 CFPP27918 469 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 OR1E1P30953 314 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 MAN1A1P33908 653 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 STAT5AP42229 794 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 PMS2P54278 862 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 ARF5P84085 180 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 NME3Q13232 169 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 ERV3-1Q14264 604 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 NADK2Q4G0N4 442 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 TMEM52BQ4KMG9 183 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 LRRC73Q5JTD7 316 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 TMEM71Q6P5X7 295 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 FOXR2Q6PJQ5 311 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 CEACAM20Q6UY09 585 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 ZNF783Q6ZMS7 281 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 APLFQ8IW19 511 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-236ENST00000556220 CEP57L1Q8IYX8 460 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 ZNF683Q8IZ20 524 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 RYBPQ8N488 228 aaPredicted RBP6.86□□□□□ -1.31
ATXN3-236ENST00000556220 ESX1Q8N693 406 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 ABHD4Q8TB40 342 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 PDCD6IPQ8WUM4 868 aaKnown RBP6.86□□□□□ -1.31
ATXN3-236ENST00000556220 PAGE5Q96GU1 130 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 C5orf34Q96MH7 638 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 CTRCQ99895 268 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 WRAP53Q9BUR4 548 aaKnown RBP6.86□□□□□ -1.31
ATXN3-236ENST00000556220 SLC29A3Q9BZD2 475 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 MRPL40Q9NQ50 206 aaKnown RBP6.86□□□□□ -1.31
ATXN3-236ENST00000556220 FBXO8Q9NRD0 319 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 LMBRD1Q9NUN5 540 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 SPATS2LQ9NUQ6 558 aaKnown RBP6.86□□□□□ -1.31
ATXN3-236ENST00000556220 MPP6Q9NZW5 540 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 TMEM9Q9P0T7 183 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 SLAMF8Q9P0V8 285 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 COQ6Q9Y2Z9 468 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 SNX10Q9Y5X0 201 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 RPS6KL1Q9Y6S9 549 aa6.86□□□□□ -1.31
ATXN3-236ENST00000556220 IGHV1OR21-1A0A087WYE8 117 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 CACNB4O00305 520 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-236ENST00000556220 KRIT1O00522 736 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 INPP4BO15327 924 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 CBX6O95503 412 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 RECKO95980 971 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 GSRP00390 522 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 ESR1P03372 595 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 PCCBP05166 539 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 HOXC4P09017 264 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-236ENST00000556220 EPB41P11171 864 aaKnown RBP6.85□□□□□ -1.31
ATXN3-236ENST00000556220 CCNB1P14635 433 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 TFE3P19532 575 aaPredicted RBP6.85□□□□□ -1.31
ATXN3-236ENST00000556220 CSF2RBP32927 897 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 DLSTP36957 453 aa6.85□□□□□ -1.31
ATXN3-236ENST00000556220 LEPRP48357 1165 aaKnown RBP6.85□□□□□ -1.31
ATXN3-236ENST00000556220 SUOXP51687 545 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms