RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 PCDH10Q9P2E7 1040 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 PCDHGB7Q9Y5F8 929 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 PXDNQ92626 1479 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 CSDE1O75534 798 aaKnown RBP10.68□□□□□ -0.7
ACTN1-216ENST00000556083 SOX30O94993 753 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 ABRQ12979 859 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 USP4Q13107 963 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 LRRC17Q8N6Y2 441 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 CDYL2Q8N8U2 506 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 FBXO30Q8TB52 745 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 FCGR1BQ92637 280 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 MIPEPQ99797 713 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 SLC2A11Q9BYW1 496 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 TRIM2Q9C040 744 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 REXO4Q9GZR2 422 aaKnown RBP10.68□□□□□ -0.7
ACTN1-216ENST00000556083 AGO3Q9H9G7 860 aaKnown RBP10.68□□□□□ -0.7
ACTN1-216ENST00000556083 IGSF9Q9P2J2 1179 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-216ENST00000556083 TRIM43BA6NCK2 446 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 TEX46H3BTG2 121 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 CDK14O94921 469 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 DHFRP00374 187 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 PIM1P11309 404 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-216ENST00000556083 LAMP2P13473 410 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 ALOX12P18054 663 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 ALDH4A1P30038 563 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 NSG1P42857 185 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 RPIAP49247 311 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 LIMK2P53671 638 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 GNA12Q03113 381 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 KLHL24Q6TFL4 600 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 DNAJC14Q6Y2X3 702 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-216ENST00000556083 GCNT7Q6ZNI0 430 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 ILDR1Q86SU0 546 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-216ENST00000556083 CUZD1Q86UP6 607 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 DNAAF5Q86Y56 855 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 MCEMP1Q8IX19 187 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 CEP41Q9BYV8 373 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 CCDC177Q9NQR7 707 aaPredicted RBP10.68□□□□□ -0.7
ACTN1-216ENST00000556083 CFL2Q9Y281 166 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 MROH2AA6NES4 1674 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 MROH1Q8NDA8 1641 aa10.68□□□□□ -0.7
ACTN1-216ENST00000556083 LGR5O75473 907 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 MBTD1Q05BQ5 628 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 PPP1R26Q5T8A7 1209 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-216ENST00000556083 RNASEH2BQ5TBB1 312 aaKnown RBP10.67□□□□□ -0.7
ACTN1-216ENST00000556083 KIAA0930Q6ICG6 404 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-216ENST00000556083 ZNF540Q8NDQ6 660 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 KCTD4Q8WVF5 259 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 ZNF347Q96SE7 839 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 ABCG4Q9H172 646 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 HECAQ9UBI9 543 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-216ENST00000556083 RUVBL1Q9Y265 456 aaKnown RBP10.67□□□□□ -0.7
ACTN1-216ENST00000556083 PLLPQ9Y342 182 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 C3P01024 1663 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 STX16-NPEPL1H3BU86 382 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 XKRYO14609 159 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 STX16O14662 325 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 C1RP00736 705 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 TRBC1P01850 177 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 CHRNGP07510 517 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 IGFBP4P22692 258 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 FLT3LGP49771 235 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 TAF10Q12962 218 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 ZCCHC12Q6PEW1 402 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 SPESP1Q6UW49 350 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 TMC5Q6UXY8 1006 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 RANBP3LQ86VV4 465 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-216ENST00000556083 MAGEE2Q8TD90 523 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-216ENST00000556083 RASSF1Q9NS23 344 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 LGALS13Q9UHV8 139 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 CCDC182A6NF36 153 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 SLC28A2O43868 658 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 USP12O75317 370 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 SEC24AO95486 1093 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 PIGRP01833 764 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 C4BPAP04003 597 aaKnown RBP10.67□□□□□ -0.7
ACTN1-216ENST00000556083 PDX1P52945 283 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 TAS2R41P59536 307 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 ERVK-21P61565 698 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 VBP1P61758 197 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 ELF3P78545 371 aaPredicted RBP10.67□□□□□ -0.7
ACTN1-216ENST00000556083 NEDD8Q15843 81 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 FAM153CQ494X1 144 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 CYP2R1Q6VVX0 501 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 MARK2Q7KZI7 788 aaKnown RBP10.67□□□□□ -0.7
ACTN1-216ENST00000556083 ZZZ3Q8IYH5 903 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 PGAM4Q8N0Y7 254 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 CYP4X1Q8N118 509 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 IGFLR1Q9H665 355 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 HCN3Q9P1Z3 774 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 CFAP97Q9P2B7 532 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 TCAF1Q9Y4C2 921 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 AK5Q9Y6K8 562 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 YDJCA8MPS7 323 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 VSTM5A8MXK1 200 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 PTGES3LE9PB15 166 aa10.67□□□□□ -0.7
ACTN1-216ENST00000556083 AKAP8O43823 692 aaKnown RBP10.67□□□□□ -0.7
ACTN1-216ENST00000556083 GATBO75879 557 aaKnown RBP10.67□□□□□ -0.7
ACTN1-216ENST00000556083 AKT2P31751 481 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms