RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 KDELC2Q7Z4H8 507 aa16.81■□□□□ 0.28
XRCC3-215ENST00000555964 ARHGAP22Q7Z5H3 698 aa16.81■□□□□ 0.28
XRCC3-215ENST00000555964 TRIM74Q86UV6 250 aa16.81■□□□□ 0.28
XRCC3-215ENST00000555964 ZNF761Q86XN6 746 aaPredicted RBP16.81■□□□□ 0.28
XRCC3-215ENST00000555964 PTRH1Q86Y79 214 aaKnown RBP16.81■□□□□ 0.28
XRCC3-215ENST00000555964 AOPEPQ8N6M6 819 aa16.81■□□□□ 0.28
XRCC3-215ENST00000555964 NIPA2Q8N8Q9 360 aa16.81■□□□□ 0.28
XRCC3-215ENST00000555964 CCHCR1Q8TD31 782 aa16.81■□□□□ 0.28
XRCC3-215ENST00000555964 NCSTNQ92542 709 aa16.81■□□□□ 0.28
XRCC3-215ENST00000555964 RIOK2Q9BVS4 552 aaKnown RBP16.81■□□□□ 0.28
XRCC3-215ENST00000555964 HSD3B7Q9H2F3 369 aa16.81■□□□□ 0.28
XRCC3-215ENST00000555964 PCDH18Q9HCL0 1135 aa16.81■□□□□ 0.28
XRCC3-215ENST00000555964 IP6K2Q9UHH9 426 aa16.81■□□□□ 0.28
XRCC3-215ENST00000555964 PLEKHM1Q9Y4G2 1056 aa16.81■□□□□ 0.28
XRCC3-215ENST00000555964 RGSL1A5PLK6 1076 aa16.8■□□□□ 0.28
XRCC3-215ENST00000555964 DDX3XO00571 662 aaKnown RBP eCLIP16.8■□□□□ 0.28
XRCC3-215ENST00000555964 INPP4BO15327 924 aa16.8■□□□□ 0.28
XRCC3-215ENST00000555964 NTRK1P04629 796 aa16.8■□□□□ 0.28
XRCC3-215ENST00000555964 PDHA1P08559 390 aa16.8■□□□□ 0.28
XRCC3-215ENST00000555964 GARSP41250 739 aaKnown RBP16.8■□□□□ 0.28
XRCC3-215ENST00000555964 MAP7Q14244 749 aa16.8■□□□□ 0.28
XRCC3-215ENST00000555964 HADHQ16836 314 aaKnown RBP16.8■□□□□ 0.28
XRCC3-215ENST00000555964 PLXDC1Q8IUK5 500 aa16.8■□□□□ 0.28
XRCC3-215ENST00000555964 PHYKPLQ8IUZ5 450 aa16.8■□□□□ 0.28
XRCC3-215ENST00000555964 ESX1Q8N693 406 aa16.8■□□□□ 0.28
XRCC3-215ENST00000555964 APOBEC4Q8WW27 367 aaKnown RBP16.8■□□□□ 0.28
XRCC3-215ENST00000555964 FATE1Q969F0 183 aa16.8■□□□□ 0.28
XRCC3-215ENST00000555964 LYSMD1Q96S90 227 aa16.8■□□□□ 0.28
XRCC3-215ENST00000555964 TDRD1Q9BXT4 1180 aaKnown RBP16.8■□□□□ 0.28
XRCC3-215ENST00000555964 ISCUQ9H1K1 167 aa16.8■□□□□ 0.28
XRCC3-215ENST00000555964 EPN3Q9H201 632 aa16.8■□□□□ 0.28
XRCC3-215ENST00000555964 RTN4Q9NQC3 1192 aaKnown RBP16.8■□□□□ 0.28
XRCC3-215ENST00000555964 PKD2L2Q9NZM6 624 aa16.8■□□□□ 0.28
XRCC3-215ENST00000555964 TTLL3Q9Y4R7 772 aa16.8■□□□□ 0.28
XRCC3-215ENST00000555964 TMEM184BQ9Y519 407 aaPredicted RBP16.8■□□□□ 0.28
XRCC3-215ENST00000555964 ZNF106Q9H2Y7 1883 aaKnown RBP16.8■□□□□ 0.28
XRCC3-215ENST00000555964 TRBV23OR9-2A0A075B6M9 112 aa16.79■□□□□ 0.28
XRCC3-215ENST00000555964 SMTNL1A8MU46 457 aa16.79■□□□□ 0.28
XRCC3-215ENST00000555964 A8MU76 341 aa16.79■□□□□ 0.28
XRCC3-215ENST00000555964 POLR1CO15160 346 aaPredicted RBP16.79■□□□□ 0.28
XRCC3-215ENST00000555964 DNAJC6O75061 913 aa16.79■□□□□ 0.28
XRCC3-215ENST00000555964 STK17BO94768 372 aa16.79■□□□□ 0.28
XRCC3-215ENST00000555964 F3P13726 295 aa16.79■□□□□ 0.28
XRCC3-215ENST00000555964 GALNT2Q10471 571 aa16.79■□□□□ 0.28
XRCC3-215ENST00000555964 NFATC2Q13469 925 aa16.79■□□□□ 0.28
XRCC3-215ENST00000555964 IFI16Q16666 785 aaKnown RBP16.79■□□□□ 0.28
XRCC3-215ENST00000555964 IYDQ6PHW0 289 aa16.79■□□□□ 0.28
XRCC3-215ENST00000555964 RFLNAQ6ZTI6 216 aa16.79■□□□□ 0.28
XRCC3-215ENST00000555964 CHST15Q7LFX5 561 aaPredicted RBP16.79■□□□□ 0.28
XRCC3-215ENST00000555964 MAML1Q92585 1016 aa16.79■□□□□ 0.28
XRCC3-215ENST00000555964 ANAPC7Q9UJX3 599 aa16.79■□□□□ 0.28
XRCC3-215ENST00000555964 BZW2Q9Y6E2 419 aaKnown RBP16.79■□□□□ 0.28
XRCC3-215ENST00000555964 LRRK2Q5S007 2527 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 C1orf232A0A0U1RR37 186 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 LILRA5A6NI73 299 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 CYSRT1A8MQ03 144 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 GPR89AB7ZAQ6 455 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 MATN3O15232 486 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 ANKRD34CP0C6C1 535 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 GPR89BP0CG08 455 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 PRKAR1AP10644 381 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 ACP5P13686 325 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 TCN2P20062 427 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 MX2P20592 715 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 MAPK9P45984 424 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 SLC25A11Q02978 314 aaKnown RBP16.78■□□□□ 0.28
XRCC3-215ENST00000555964 SRSF1Q07955 248 aaKnown RBP eCLIP16.78■□□□□ 0.28
XRCC3-215ENST00000555964 PTPRRQ15256 657 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 SKIDA1Q1XH10 827 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 TDRD12Q587J7 1177 aaKnown RBP16.78■□□□□ 0.28
XRCC3-215ENST00000555964 CCDC183Q5T5S1 534 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 CYB5D1Q6P9G0 228 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 LPCAT1Q8NF37 534 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 STARD8Q92502 1023 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 AGAP2Q99490 1192 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 CARD9Q9H257 536 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 FAM83DQ9H4H8 585 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 UCK1Q9HA47 277 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 PCDH9Q9HC56 1237 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 RBM22Q9NW64 420 aaKnown RBP eCLIP16.78■□□□□ 0.28
XRCC3-215ENST00000555964 ANKMY1Q9P2S6 941 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 CPNE7Q9UBL6 633 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 TBC1D29Q9UFV1 150 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 CHKBQ9Y259 395 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 KCTD3Q9Y597 815 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 PCDHB3Q9Y5E6 796 aa16.78■□□□□ 0.28
XRCC3-215ENST00000555964 MN1Q10571 1320 aaPredicted RBP16.77■□□□□ 0.28
XRCC3-215ENST00000555964 MYO1FO00160 1098 aa16.77■□□□□ 0.28
XRCC3-215ENST00000555964 NKX2-8O15522 239 aa16.77■□□□□ 0.28
XRCC3-215ENST00000555964 MFSD11O43934 449 aa16.77■□□□□ 0.28
XRCC3-215ENST00000555964 SNX2O60749 519 aa16.77■□□□□ 0.28
XRCC3-215ENST00000555964 MTA2O94776 668 aa16.77■□□□□ 0.28
XRCC3-215ENST00000555964 CLDN7O95471 211 aa16.77■□□□□ 0.28
XRCC3-215ENST00000555964 MBD3O95983 291 aa16.77■□□□□ 0.28
XRCC3-215ENST00000555964 TCF4P15884 667 aa16.77■□□□□ 0.28
XRCC3-215ENST00000555964 CCNCP24863 283 aa16.77■□□□□ 0.28
XRCC3-215ENST00000555964 SSR1P43307 286 aaKnown RBP16.77■□□□□ 0.28
XRCC3-215ENST00000555964 SPINT3P49223 89 aa16.77■□□□□ 0.28
XRCC3-215ENST00000555964 CLCNKAP51800 687 aa16.77■□□□□ 0.28
XRCC3-215ENST00000555964 FOXK1P85037 733 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms