RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 DACH2Q96NX9 599 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 FNBP1Q96RU3 617 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 THUMPD3Q9BV44 507 aaKnown RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 NUP85Q9BW27 656 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 MRPL9Q9BYD2 267 aaKnown RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 SLCO5A1Q9H2Y9 848 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 MAGIXQ9H6Y5 334 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 DNAJC18Q9H819 358 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 EPB41L5Q9HCM4 733 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 MKKSQ9NPJ1 570 aaPredicted RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 MED4Q9NPJ6 270 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 GPR108Q9NPR9 543 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 HINT3Q9NQE9 182 aaKnown RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 MBNL1Q9NR56 388 aaKnown RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 HOXC10Q9NYD6 342 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 DONSONQ9NYP3 566 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 STK26Q9P289 416 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 CGNQ9P2M7 1197 aaKnown RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 KLHL13Q9P2N7 655 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 IL17BQ9UHF5 180 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 DDX25Q9UHL0 483 aaKnown RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 SNX5Q9Y5X3 404 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 KAT6AQ92794 2004 aa3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 CFAP65Q6ZU64 1925 aaKnown RBP3.03□□□□□ -1.92
MTHFD1-212ENST00000555858 A0A087X1B8 175 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 TRAV34A0A0B4J273 112 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 EDDM13A0A1B0GTR0 161 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 CPED1A4D0V7 1026 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 GAGE12JA6NER3 117 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 CPLX1O14810 134 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 RSL1D1O76021 490 aaKnown RBP3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 TRUB2O95900 331 aaKnown RBP3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 GH2P01242 217 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 ICAM1P05362 532 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 CTSAP10619 480 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 VPREB1P12018 145 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 SKILP12757 684 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 ATP6V1B1P15313 513 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 GJA1P17302 382 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 HOXC13P31276 330 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 TLX1P31314 330 aaPredicted RBP3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 STIP1P31948 543 aaKnown RBP3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 KIF5BP33176 963 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 PPP3CCP48454 512 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 NPY4RP50391 375 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 METAP2P50579 478 aaKnown RBP eCLIP3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 POLGP54098 1239 aaPredicted RBP3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 RAD23BP54727 409 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 SIRPAP78324 504 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 GAD2Q05329 585 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 RALGDSQ12967 914 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 TRDNQ13061 729 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 KRT33BQ14525 404 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 ODF2Q5BJF6 829 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 EPHA10Q5JZY3 1008 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 ASPHD1Q5U4P2 390 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 PAPD7Q5XG87 772 aaKnown RBP3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 GGNBP1Q5YKI7 109 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 ANKRD54Q6NXT1 300 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 CAVIN1Q6NZI2 390 aaKnown RBP3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 MIS18BP1Q6P0N0 1132 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 SUSD1Q6UWL2 747 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 OLFML1Q6UWY5 402 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 HAUS6Q7Z4H7 955 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 ADCK2Q7Z695 626 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 CCDC91Q7Z6B0 441 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 SDCCAG8Q86SQ7 713 aaPredicted RBP3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 LDB1Q86U70 411 aaPredicted RBP3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 NUP93Q8N1F7 819 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 SPATA6LQ8N4H0 392 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 CFAP61Q8NHU2 1237 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 SLC35F5Q8WV83 523 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 C17orf50Q8WW18 174 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 N4BP2L2Q92802 583 aaPredicted RBP3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 ERGIC1Q969X5 290 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 ZFYVE19Q96K21 471 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 LINC00615Q96LM1 132 aaPredicted RBP3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 MSTO1Q9BUK6 570 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 GPR88Q9GZN0 384 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 PIGMQ9H3S5 423 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 KCNK15Q9H427 330 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 TASP1Q9H6P5 420 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 ESRP2Q9H6T0 727 aaKnown RBP3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 COPS7BQ9H9Q2 264 aaPredicted RBP3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 TRPV5Q9NQA5 729 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 PIH1D3Q9NQM4 214 aaKnown RBP3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 OLAHQ9NV23 265 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 DCAF16Q9NXF7 216 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 HAO2Q9NYQ3 351 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 LARSQ9P2J5 1176 aaKnown RBP3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 MTRRQ9UBK8 725 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 OR14J1Q9UGF5 321 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 PCSK1NQ9UHG2 260 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 HACL1Q9UJ83 578 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 INSL6Q9Y581 213 aa3.02□□□□□ -1.93
MTHFD1-212ENST00000555858 SCRIBQ14160 1630 aa3.01□□□□□ -1.93
MTHFD1-212ENST00000555858 RAD50Q92878 1312 aa3.01□□□□□ -1.93
MTHFD1-212ENST00000555858 A0A0G2JK05 382 aa3.01□□□□□ -1.93
MTHFD1-212ENST00000555858 LOC100996750A0A140TA64 210 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms