RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 PHTF1Q9UMS5 762 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 PPIL1Q9Y3C6 166 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 OR1A2Q9Y585 309 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 RAI2Q9Y5P3 530 aa9.61□□□□□ -0.87
ACTN1-215ENST00000555616 ITPR1Q14643 2758 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 CAPN8A6NHC0 703 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 LMO7DNF2Z398 122 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 F5H423 210 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-215ENST00000555616 AP3B1O00203 1094 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 ERLIN1O75477 346 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 RASGRP1O95267 797 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 AP2A1O95782 977 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 GP1BAP07359 652 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 HOXC4P09017 264 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-215ENST00000555616 CYP2A6P11509 494 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-215ENST00000555616 HTR1BP28222 390 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 HNF1BP35680 557 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 TRIM23P36406 574 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 CD86P42081 329 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 CARSP49589 748 aaKnown RBP9.6□□□□□ -0.87
ACTN1-215ENST00000555616 BLKP51451 505 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 HK3P52790 923 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 RPL26P61254 145 aaKnown RBP9.6□□□□□ -0.87
ACTN1-215ENST00000555616 DAB2P98082 770 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 PPARDQ03181 441 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 NIPAL4Q0D2K0 466 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 KCNJ11Q14654 390 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 ACOX1Q15067 660 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 KCTD19Q17RG1 926 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-215ENST00000555616 MAP9Q49MG5 647 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 HES3Q5TGS1 186 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 HIBCHQ6NVY1 386 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-215ENST00000555616 CACTIN-AS1Q8N1I8 211 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 FSTL5Q8N475 847 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-215ENST00000555616 NAT8LQ8N9F0 302 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 LMX1AQ8TE12 382 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 ART4Q93070 314 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 FUBP1Q96AE4 644 aaKnown RBP9.6□□□□□ -0.87
ACTN1-215ENST00000555616 NUS1Q96E22 293 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 DTD2Q96FN9 168 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 WDR92Q96MX6 357 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 RBM15Q96T37 977 aaKnown RBP eCLIP9.6□□□□□ -0.87
ACTN1-215ENST00000555616 FMO2Q99518 471 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 APOOQ9BUR5 198 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 SLC13A1Q9BZW2 595 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 WDR26Q9H7D7 661 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 XAB2Q9HCS7 855 aaKnown RBP9.6□□□□□ -0.87
ACTN1-215ENST00000555616 EVA1BQ9NVM1 165 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 KCTD5Q9NXV2 234 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 NCKIPSDQ9NZQ3 722 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 DKK4Q9UBT3 224 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 ZMIZ1Q9ULJ6 1067 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 NFU1Q9UMS0 254 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 RPL26L1Q9UNX3 145 aaKnown RBP9.6□□□□□ -0.87
ACTN1-215ENST00000555616 DGKBQ9Y6T7 804 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 WDFY3Q8IZQ1 3526 aa9.6□□□□□ -0.87
ACTN1-215ENST00000555616 ARID1BQ8NFD5 2236 aaPredicted RBP9.59□□□□□ -0.87
ACTN1-215ENST00000555616 A0A0J9YYE9 177 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 CCDC151A5D8V7 595 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 FAM149AA5PLN7 773 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 A8MX80 341 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 CACNB4O00305 520 aaPredicted RBP9.59□□□□□ -0.87
ACTN1-215ENST00000555616 PMPCBO75439 489 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 SUN1O94901 812 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 PRLP01236 227 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 TRBC1P01850 177 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 MMP2P08253 660 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 PDHA1P08559 390 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 ALPIP09923 528 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 MYCLP1P12525 358 aaPredicted RBP9.59□□□□□ -0.87
ACTN1-215ENST00000555616 TSHRP16473 764 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 KELP23276 732 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 TEAD1P28347 426 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 ETV3P41162 512 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 DUSP3P51452 185 aaPredicted RBP9.59□□□□□ -0.87
ACTN1-215ENST00000555616 ARL4CP56559 192 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 CLDN6P56747 220 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 SRP54P61011 504 aaKnown RBP9.59□□□□□ -0.87
ACTN1-215ENST00000555616 VSNL1P62760 191 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 SKOR1P84550 965 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 E2F1Q01094 437 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 INSM1Q01101 510 aaPredicted RBP9.59□□□□□ -0.87
ACTN1-215ENST00000555616 PTPRRQ15256 657 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 ELOCQ15369 112 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 TRADDQ15628 312 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 HIF1AQ16665 826 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 DEFB133Q30KQ1 61 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 PRRT3Q5FWE3 981 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 C6orf132Q5T0Z8 1188 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 KCTD16Q68DU8 428 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 FBXO38Q6PIJ6 1188 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 HSD11B1LQ7Z5J1 315 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 MTERF4Q7Z6M4 381 aaKnown RBP9.59□□□□□ -0.87
ACTN1-215ENST00000555616 TSPAN33Q86UF1 283 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 MARCH9Q86YJ5 346 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 KLHDC8BQ8IXV7 354 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 PDIK1LQ8N165 341 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 PELI3Q8N2H9 469 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 SDR16C5Q8N3Y7 309 aa9.59□□□□□ -0.87
ACTN1-215ENST00000555616 PDCD7Q8N8D1 485 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms