RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 ARMC8Q8IUR7 673 aa3.67□□□□□ -1.82
SCFD1-216ENST00000555550 SMARCE1Q969G3 411 aa3.67□□□□□ -1.82
SCFD1-216ENST00000555550 ALG14Q96F25 216 aa3.67□□□□□ -1.82
SCFD1-216ENST00000555550 PSMD1Q99460 953 aa3.67□□□□□ -1.82
SCFD1-216ENST00000555550 NEURL2Q9BR09 285 aa3.67□□□□□ -1.82
SCFD1-216ENST00000555550 PAIP1Q9H074 479 aaKnown RBP3.67□□□□□ -1.82
SCFD1-216ENST00000555550 BRF2Q9HAW0 419 aa3.67□□□□□ -1.82
SCFD1-216ENST00000555550 SEBOXQ9HB31 216 aaPredicted RBP3.67□□□□□ -1.82
SCFD1-216ENST00000555550 PCDHB16Q9NRJ7 776 aa3.67□□□□□ -1.82
SCFD1-216ENST00000555550 FAM118AQ9NWS6 357 aa3.67□□□□□ -1.82
SCFD1-216ENST00000555550 SAGE1Q9NXZ1 904 aa3.67□□□□□ -1.82
SCFD1-216ENST00000555550 MKLN1Q9UL63 735 aa3.67□□□□□ -1.82
SCFD1-216ENST00000555550 PTPRCP08575 1304 aa3.67□□□□□ -1.82
SCFD1-216ENST00000555550 A0A1W2PQM1 296 aa3.66□□□□□ -1.82
SCFD1-216ENST00000555550 ZNHIT1O43257 154 aa3.66□□□□□ -1.82
SCFD1-216ENST00000555550 TNFSF14O43557 240 aa3.66□□□□□ -1.82
SCFD1-216ENST00000555550 ZNF182P17025 639 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-216ENST00000555550 HOXC13P31276 330 aa3.66□□□□□ -1.82
SCFD1-216ENST00000555550 LINC01547P58512 204 aaPredicted RBP3.66□□□□□ -1.82
SCFD1-216ENST00000555550 PRICKLE4Q2TBC4 344 aa3.66□□□□□ -1.82
SCFD1-216ENST00000555550 FAM171BQ6P995 826 aa3.66□□□□□ -1.82
SCFD1-216ENST00000555550 BRAT1Q6PJG6 821 aa3.66□□□□□ -1.82
SCFD1-216ENST00000555550 MAP7D3Q8IWC1 876 aa3.66□□□□□ -1.82
SCFD1-216ENST00000555550 CNTROBQ8N137 903 aa3.66□□□□□ -1.82
SCFD1-216ENST00000555550 BEST3Q8N1M1 668 aa3.66□□□□□ -1.82
SCFD1-216ENST00000555550 MORC4Q8TE76 937 aa3.66□□□□□ -1.82
SCFD1-216ENST00000555550 SLC38A5Q8WUX1 472 aa3.66□□□□□ -1.82
SCFD1-216ENST00000555550 ZNF354BQ96LW1 612 aa3.66□□□□□ -1.82
SCFD1-216ENST00000555550 USP44Q9H0E7 712 aa3.66□□□□□ -1.82
SCFD1-216ENST00000555550 RANBP17Q9H2T7 1088 aaKnown RBP3.66□□□□□ -1.82
SCFD1-216ENST00000555550 WASH6PQ9NQA3 447 aa3.66□□□□□ -1.82
SCFD1-216ENST00000555550 FBXL2Q9UKC9 423 aa3.66□□□□□ -1.82
SCFD1-216ENST00000555550 INTS6Q9UL03 887 aaKnown RBP3.66□□□□□ -1.82
SCFD1-216ENST00000555550 SMAD5-AS1Q9Y6J3 95 aa3.66□□□□□ -1.82
SCFD1-216ENST00000555550 IGKV3D-15A0A087WSY6 115 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 NKX2-2O95096 273 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 CD53P19397 219 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 PIP4K2AP48426 406 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-216ENST00000555550 TUBP50607 506 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 PLIN5Q00G26 463 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 GRIK2Q13002 908 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 MAD2L1Q13257 205 aaPredicted RBP3.65□□□□□ -1.83
SCFD1-216ENST00000555550 CDC73Q6P1J9 531 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 RAD9BQ6WBX8 426 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 DPPA4Q7L190 304 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 CNBD1Q8NA66 436 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 ACVR1CQ8NER5 493 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 OR14L1PQ8NHC6 308 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 PSPC1Q8WXF1 523 aaKnown RBP3.65□□□□□ -1.83
SCFD1-216ENST00000555550 DNAAF4Q8WXU2 420 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 APBB2Q92870 758 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 ZUFSPQ96AP4 578 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 RHBDF1Q96CC6 855 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 LINGO1Q96FE5 620 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 TMEM68Q96MH6 324 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 ACOX2Q99424 681 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 NAALADL1Q9UQQ1 740 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 DLGAP4Q9Y2H0 992 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 CAPN7Q9Y6W3 813 aa3.65□□□□□ -1.83
SCFD1-216ENST00000555550 FAM237AA0A1B0GTK4 181 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 CAVIN2O95810 425 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 FAM106CPP0CH98 169 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 HOXC9P31274 260 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 TIMP3P35625 211 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 FASLGP48023 281 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 MMP14P50281 582 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 COG7P83436 770 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 TBX2Q13207 712 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-216ENST00000555550 OLIG2Q13516 323 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 FRG1Q14331 258 aaKnown RBP3.64□□□□□ -1.83
SCFD1-216ENST00000555550 MYLK3Q32MK0 819 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 DPCR1Q3MIW9 517 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 SRBD1Q8N5C6 995 aaKnown RBP3.64□□□□□ -1.83
SCFD1-216ENST00000555550 OR52I2Q8NH67 350 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 OR5R1Q8NH85 324 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 THAP6Q8TBB0 222 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 TAAR8Q969N4 342 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 IGSF8Q969P0 613 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 RRP36Q96EU6 259 aaKnown RBP3.64□□□□□ -1.83
SCFD1-216ENST00000555550 RRNAD1Q96FB5 475 aaKnown RBP3.64□□□□□ -1.83
SCFD1-216ENST00000555550 NR1H4Q96RI1 486 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-216ENST00000555550 LRMDAQ9H2I8 198 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 PDCL3Q9H2J4 239 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 ZNF696Q9H7X3 374 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 DDX43Q9NXZ2 648 aaKnown RBP3.64□□□□□ -1.83
SCFD1-216ENST00000555550 TAS2R10Q9NYW0 307 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 PADI3Q9ULW8 664 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 CRYL1Q9Y2S2 319 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 MAU2Q9Y6X3 613 aa3.64□□□□□ -1.83
SCFD1-216ENST00000555550 A6NLC8 198 aa3.63□□□□□ -1.83
SCFD1-216ENST00000555550 PMS2P5A8MQ11 134 aa3.63□□□□□ -1.83
SCFD1-216ENST00000555550 EDIL3O43854 480 aa3.63□□□□□ -1.83
SCFD1-216ENST00000555550 FGF5P12034 268 aa3.63□□□□□ -1.83
SCFD1-216ENST00000555550 UBA1P22314 1058 aaKnown RBP3.63□□□□□ -1.83
SCFD1-216ENST00000555550 EPHA8P29322 1005 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-216ENST00000555550 CLDN20P56880 219 aa3.63□□□□□ -1.83
SCFD1-216ENST00000555550 DECR1Q16698 335 aa3.63□□□□□ -1.83
SCFD1-216ENST00000555550 CXorf66Q5JRM2 361 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-216ENST00000555550 C18orf63Q68DL7 685 aa3.63□□□□□ -1.83
SCFD1-216ENST00000555550 ACAD10Q6JQN1 1059 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms