RNA–Protein interactions for RNA: ENST00000555490.1

AL352955.1-201, humanhuman

TSL 3 BASIC

Gene AL352955.1, Length 332 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL352955.1-201ENST00000555490 UHRF2Q96PU4 802 aa3.18□□□□□ -1.9
AL352955.1-201ENST00000555490 MTERF1Q99551 399 aaKnown RBP3.18□□□□□ -1.9
AL352955.1-201ENST00000555490 NEURL2Q9BR09 285 aa3.18□□□□□ -1.9
AL352955.1-201ENST00000555490 AGXT2Q9BYV1 514 aa3.18□□□□□ -1.9
AL352955.1-201ENST00000555490 USP44Q9H0E7 712 aa3.18□□□□□ -1.9
AL352955.1-201ENST00000555490 GAREM1Q9H706 876 aa3.18□□□□□ -1.9
AL352955.1-201ENST00000555490 SH2D4AQ9H788 454 aa3.18□□□□□ -1.9
AL352955.1-201ENST00000555490 SLC28A3Q9HAS3 691 aa3.18□□□□□ -1.9
AL352955.1-201ENST00000555490 NOX4Q9NPH5 578 aa3.18□□□□□ -1.9
AL352955.1-201ENST00000555490 RRP7BPQ9NSQ0 103 aa3.18□□□□□ -1.9
AL352955.1-201ENST00000555490 FAM118AQ9NWS6 357 aa3.18□□□□□ -1.9
AL352955.1-201ENST00000555490 CWC15Q9P013 229 aaKnown RBP3.18□□□□□ -1.9
AL352955.1-201ENST00000555490 FHOD3Q2V2M9 1422 aa3.18□□□□□ -1.9
AL352955.1-201ENST00000555490 AKNAQ7Z591 1439 aa3.18□□□□□ -1.9
AL352955.1-201ENST00000555490 PCF11O94913 1555 aaKnown RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 SCN5AQ14524 2016 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 J3KRW8 73 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 VCYO14598 125 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 DVL1O14640 695 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 LDLRAD4O15165 306 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 FGF17O60258 216 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 PAGE4O60829 102 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 GPC4O75487 556 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 JRKO75564 520 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 SEC31AO94979 1220 aaKnown RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 NKX2-2O95096 273 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 DDX58O95786 925 aaKnown RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 SCGB1D1O95968 90 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 CENPBP07199 599 aaPredicted RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 CYC1P08574 325 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 ZNF23P17027 643 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 POLR2CP19387 275 aaPredicted RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 KCNA5P22460 613 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 ANOS1P23352 680 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 NFKBIAP25963 317 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 EIF2S3P41091 472 aaKnown RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 FMO5P49326 533 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 AMPHP49418 695 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 HOXA1P49639 335 aaPredicted RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 PDLIM4P50479 330 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 DVL1P1P54792 670 aaPredicted RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 NAP1L1P55209 391 aaKnown RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 PHEXP78562 749 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 COL28A1Q2UY09 1125 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 EIF2S3LQ2VIR3 472 aaKnown RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 PDSS1Q5T2R2 415 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 DUS1LQ6P1R4 473 aaKnown RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 DPPA4Q7L190 304 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 CUZD1Q86UP6 607 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 RNF168Q8IYW5 571 aaPredicted RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 CNTROBQ8N137 903 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 RDM1Q8NG50 284 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 LNX1Q8TBB1 728 aaPredicted RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 PSPC1Q8WXF1 523 aaKnown RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 HDAC2Q92769 488 aaKnown RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 ARHGEF2Q92974 986 aaKnown RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 NUDCD1Q96RS6 583 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 CSF3RQ99062 836 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 PIP5K1AQ99755 562 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 ESRP2Q9H6T0 727 aaKnown RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 PLEKHA5Q9HAU0 1116 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 OLA1Q9NTK5 396 aaKnown RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 C1RLQ9NZP8 487 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 ZNF69Q9UC07 566 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 STK39Q9UEW8 545 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 FBXL2Q9UKC9 423 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 INTS6Q9UL03 887 aaKnown RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 PADI1Q9ULC6 663 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 LAS1LQ9Y4W2 734 aaKnown RBP3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 KCNE2Q9Y6J6 123 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 HECW1Q76N89 1606 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 MIA2Q96PC5 1412 aa3.17□□□□□ -1.9
AL352955.1-201ENST00000555490 NUP153P49790 1475 aaKnown RBP3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 NEO1Q92859 1461 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 SUPT6HQ7KZ85 1726 aaKnown RBP3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 ZCCHC11Q5TAX3 1644 aaKnown RBP3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 DHX57Q6P158 1386 aaKnown RBP3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 ARAP3Q8WWN8 1544 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 FAM237AA0A1B0GTK4 181 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 LILRA5A6NI73 299 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 SRRM3A6NNA2 597 aaPredicted RBP3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 C15orf62A8K5M9 175 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 FAM72CH0Y354 149 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 C16orf97H3BN30 126 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 SNAP23O00161 211 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 SCAMP1O15126 338 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 MID1O15344 667 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 WDR1O75083 606 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 MBD4O95243 580 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 CAVIN2O95810 425 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 IGKV3-20P01619 116 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 NR2F2P24468 414 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 MAN1A1P33908 653 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 TUBP50607 506 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 MLLT10P55197 1068 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 TAS2R38P59533 333 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 KRTAP10-5P60370 271 aa3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 MRPS34P82930 218 aaKnown RBP3.16□□□□□ -1.9
AL352955.1-201ENST00000555490 PLIN5Q00G26 463 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms