RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 BFARQ9NZS9 450 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 NFKBIL1Q9UBC1 381 aaPredicted RBP10.86□□□□□ -0.67
SHMT2-218ENST00000555213 CD84Q9UIB8 345 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 CA5BQ9Y2D0 317 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 ANKRD6Q9Y2G4 727 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 OTOGLQ3ZCN5 2332 aa10.86□□□□□ -0.67
SHMT2-218ENST00000555213 A0A0U1RQS6 177 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 A0A1W2PR77 199 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 HEATR9A2RTY3 570 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 PATE3B3GLJ2 98 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 H0Y8X5 98 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 ARHGAP33O14559 1287 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 YKT6O15498 198 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 DFNA5O60443 496 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 PIAS1O75925 651 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 ENGP17813 658 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 TEAD1P28347 426 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 SPAM1P38567 509 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 HADHAP40939 763 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 GPR1P46091 355 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 ARRB1P49407 418 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-218ENST00000555213 NXPH1P58417 271 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 GRIK2Q13002 908 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 PDE1CQ14123 709 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-218ENST00000555213 INPP5AQ14642 412 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 POU6F1Q14863 301 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 SF3A2Q15428 464 aaKnown RBP10.85□□□□□ -0.67
SHMT2-218ENST00000555213 CDKN3Q16667 212 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 KIF19Q2TAC6 998 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 CEP85LQ5SZL2 805 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 ARMC3Q5W041 872 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 PDPK2PQ6A1A2 396 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 TCEAL6Q6IPX3 200 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 PNCKQ6P2M8 343 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 LAYNQ6UX15 382 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 MACC1Q6ZN28 852 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 NLRP9Q7RTR0 991 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 TECPR1Q7Z6L1 1165 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 TMEM135Q86UB9 458 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 NLRP8Q86W28 1048 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 PARGQ86W56 976 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 PALM2Q8IXS6 379 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 UNC5BQ8IZJ1 945 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 CYP4X1Q8N118 509 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 TTC30BQ8N4P2 665 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 OR13H1Q8NG92 308 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 FBF1Q8TES7 1133 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 TCEAL3Q969E4 200 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 ZNF778Q96MU6 729 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 TTC25Q96NG3 672 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 DHRS4Q9BTZ2 278 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 EDEM2Q9BV94 578 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 KIFC1Q9BW19 673 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 GTPBP2Q9BX10 602 aaKnown RBP10.85□□□□□ -0.67
SHMT2-218ENST00000555213 ROPN1BQ9BZX4 212 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-218ENST00000555213 SMOC1Q9H4F8 434 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 ROPN1Q9HAT0 212 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-218ENST00000555213 MBNL1Q9NR56 388 aaKnown RBP10.85□□□□□ -0.67
SHMT2-218ENST00000555213 FNDC3AQ9Y2H6 1198 aaKnown RBP10.85□□□□□ -0.67
SHMT2-218ENST00000555213 ARL5AQ9Y689 179 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 SLCO1B1Q9Y6L6 691 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 TNRC6BQ9UPQ9 1833 aaKnown RBP10.85□□□□□ -0.67
SHMT2-218ENST00000555213 TRPM6Q9BX84 2022 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 SDK1Q7Z5N4 2213 aa10.85□□□□□ -0.67
SHMT2-218ENST00000555213 GLYATL1P3A0A0U1RQE8 302 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 ZCWPW2A0A1B0GU75 182 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 TCRBV9S1A1TA0A576 114 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 LNP1A1A4G5 178 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 POM121BA6NF01 834 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 CXorf49A8MYA2 514 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-218ENST00000555213 H3BM21 787 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 AURKAO14965 403 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 WNT1P04628 370 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 MYCLP1P12525 358 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-218ENST00000555213 GM2AP17900 193 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 CTSKP43235 329 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 EIF3BP55884 814 aaKnown RBP10.84□□□□□ -0.67
SHMT2-218ENST00000555213 KIAA1024LP59773 190 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 PFN3P60673 137 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 IRX4P78413 519 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 NFATC4Q14934 902 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 LONRF1Q17RB8 773 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 DNAJC21Q5F1R6 531 aaKnown RBP10.84□□□□□ -0.67
SHMT2-218ENST00000555213 TRMT10BQ6PF06 316 aaKnown RBP10.84□□□□□ -0.67
SHMT2-218ENST00000555213 CES3Q6UWW8 571 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 ADAMTSL4Q6UY14 1074 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 CAPN12Q6ZSI9 719 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 MICALCLQ6ZW33 695 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 HEATR4Q86WZ0 1026 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 CBARPQ8N350 705 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-218ENST00000555213 DCLK2Q8N568 766 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 TRAM1L1Q8N609 369 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 EPS8L3Q8TE67 593 aaKnown RBP10.84□□□□□ -0.67
SHMT2-218ENST00000555213 SCAMP4Q969E2 229 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 STAMBPL1Q96FJ0 436 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 BMFQ96LC9 184 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 C19orf43Q9BQ61 176 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 RIOK2Q9BVS4 552 aaKnown RBP10.84□□□□□ -0.67
SHMT2-218ENST00000555213 SPATA16Q9BXB7 569 aa10.84□□□□□ -0.67
SHMT2-218ENST00000555213 IL22Q9GZX6 179 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms