RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 SUV39H1O43463 412 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 ATP1A1P05023 1023 aaKnown RBP12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 UGT1A3P35503 534 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 SPINT3P49223 89 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 GPLD1P80108 840 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 ZBED6P86452 979 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 KCNC4Q03721 635 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 GBE1Q04446 702 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 PEX6Q13608 980 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 IFI16Q16666 785 aaKnown RBP12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 QPCTQ16769 361 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 HENMT1Q5T8I9 393 aaKnown RBP12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 CAVIN1Q6NZI2 390 aaKnown RBP12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 IYDQ6PHW0 289 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 NDUFAF2Q8N183 169 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 CNTD1Q8N815 330 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 AGBL5Q8NDL9 886 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 CPLX3Q8WVH0 158 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 DPYSL5Q9BPU6 564 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 DDA1Q9BW61 102 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 CLMPQ9H6B4 373 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 CBX8Q9HC52 389 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 PCDH9Q9HC56 1237 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 SLC39A1Q9NY26 324 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 TBC1D29Q9UFV1 150 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 AMACRQ9UHK6 382 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 ZNHIT2Q9UHR6 403 aa12.12□□□□□ -0.47
MTHFD1-207ENST00000554677 SPTBP11277 2137 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 ZNF106Q9H2Y7 1883 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 EFCAB7A8K855 629 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 B4E171 279 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 PYGLP06737 847 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 LIFP15018 202 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 CSTF2P33240 577 aaKnown RBP eCLIP12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 TSPAN7P41732 249 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 SSR1P43307 286 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 EPHB1P54762 984 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 RPL26P61254 145 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 LRP8Q14114 963 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 PDK2Q15119 407 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 NFKBIBQ15653 356 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 HADHQ16836 314 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 TIGD7Q6NT04 549 aaPredicted RBP12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 CHST15Q7LFX5 561 aaPredicted RBP12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 PRICKLE2Q7Z3G6 844 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 LUZP1Q86V48 1076 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 GALNT13Q8IUC8 556 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 ZSCAN1Q8NBB4 408 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 KCTD6Q8NC69 237 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 ZNF564Q8TBZ8 553 aaPredicted RBP12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 RAPGEF5Q92565 580 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 ARHGAP9Q9BRR9 750 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 ZNF670Q9BS34 389 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 DTLQ9NZJ0 730 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 VPS18Q9P253 973 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 PILRAQ9UKJ1 303 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 RPL26L1Q9UNX3 145 aaKnown RBP12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 RELNP78509 3460 aa12.11□□□□□ -0.47
MTHFD1-207ENST00000554677 ANKRD66B4E2M5 251 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 PROSCO94903 275 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 ASMTLO95671 621 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 JCHAINP01591 159 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 GYPCP04921 128 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 GJC1P36383 396 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 UBASH3AP57075 661 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 MC2RQ01718 297 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 BIRC2Q13490 618 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 ANKS6Q68DC2 871 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 WDR74Q6RFH5 385 aaPredicted RBP12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 TIPARPQ7Z3E1 657 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 LPCAT1Q8NF37 534 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 HDAC11Q96DB2 347 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 RTP4Q96DX8 246 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 SLC38A3Q99624 504 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 PACSIN1Q9BY11 444 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 TRIM4Q9C037 500 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 FAM117AQ9C073 453 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 FAM83DQ9H4H8 585 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 SARS2Q9NP81 518 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 GEMIN8Q9NWZ8 242 aaKnown RBP12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 IL17BQ9UHF5 180 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 DNPEPQ9ULA0 475 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 KCNK6Q9Y257 313 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 ADGRG1Q9Y653 693 aa12.1□□□□□ -0.47
MTHFD1-207ENST00000554677 MED13Q9UHV7 2174 aa12.09□□□□□ -0.47
MTHFD1-207ENST00000554677 C1orf232A0A0U1RR37 186 aa12.09□□□□□ -0.47
MTHFD1-207ENST00000554677 A8MU76 341 aa12.09□□□□□ -0.47
MTHFD1-207ENST00000554677 NUAK1O60285 661 aa12.09□□□□□ -0.47
MTHFD1-207ENST00000554677 SFTPCP11686 197 aa12.09□□□□□ -0.47
MTHFD1-207ENST00000554677 KDELR1P24390 212 aa12.09□□□□□ -0.47
MTHFD1-207ENST00000554677 HNRNPH3P31942 346 aaKnown RBP12.09□□□□□ -0.47
MTHFD1-207ENST00000554677 CD86P42081 329 aa12.09□□□□□ -0.47
MTHFD1-207ENST00000554677 CSRP3P50461 194 aa12.09□□□□□ -0.47
MTHFD1-207ENST00000554677 ATP1A2P50993 1020 aa12.09□□□□□ -0.47
MTHFD1-207ENST00000554677 HHEXQ03014 270 aa12.09□□□□□ -0.47
MTHFD1-207ENST00000554677 PPIDQ08752 370 aaKnown RBP12.09□□□□□ -0.47
MTHFD1-207ENST00000554677 ZBTB17Q13105 803 aa12.09□□□□□ -0.47
MTHFD1-207ENST00000554677 ASTE1Q2TB18 679 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-207ENST00000554677 ZNF648Q5T619 568 aaPredicted RBP12.09□□□□□ -0.47
MTHFD1-207ENST00000554677 DCAF12Q5T6F0 453 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms