RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 ALOX12P18054 663 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 CAPN3P20807 821 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 HOXD13P35453 343 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 HADHAP40939 763 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 PRCPP42785 496 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 MAGEA11P43364 429 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 PTDSS1P48651 473 aaKnown RBP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 POU3F4P49335 361 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 HARS2P49590 506 aaKnown RBP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 RARRES1P49788 294 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 TUBP50607 506 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 RENBPP51606 427 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 CCR3P51677 355 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 ZNF135P52742 658 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 STX17P56962 302 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 GNG2P59768 71 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 UBE2HP62256 183 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 FKBP1AP62942 108 aaKnown RBP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 CXADRP78310 365 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 FCHO2Q0JRZ9 810 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 DOC2AQ14183 400 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 KRT32Q14532 448 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 PPA1Q15181 289 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 NPTX1Q15818 432 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 TAF12Q16514 161 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 PTGISQ16647 500 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 SPDYE7PQ495Y7 208 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 CCDC58Q4VC31 144 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 LIN52Q52LA3 116 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 TTMPQ5BVD1 217 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 XKR9Q5GH70 373 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 HERC4Q5GLZ8 1057 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 LRRC8BQ6P9F7 803 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 ZYG11AQ6WRX3 759 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 CATSPERGQ6ZRH7 1159 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 STOX1Q6ZVD7 989 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 GPR141Q7Z602 305 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 DGKHQ86XP1 1220 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 THNSL2Q86YJ6 484 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 UNC45BQ8IWX7 931 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 DIS3L2Q8IYB7 885 aaKnown RBP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 LINC00518Q8N0U6 118 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 FBXL16Q8N461 479 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 LRRC71Q8N4P6 559 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 CSGALNACT2Q8N6G5 542 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 ANKRD13CQ8N6S4 541 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 SPATA5Q8NB90 893 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 LPCAT1Q8NF37 534 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 PLBD2Q8NHP8 589 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 SLC2A14Q8TDB8 520 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 ZNF384Q8TF68 577 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 PYROXD1Q8WU10 500 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 RNF139Q8WU17 664 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 NELFBQ8WX92 580 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 RIN2Q8WYP3 895 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 FAM136AQ96C01 138 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 MSANTD3Q96H12 275 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 FUBP3Q96I24 572 aaKnown RBP eCLIP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 C7orf34Q96L11 122 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 ZSCAN31Q96LW9 406 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 CCT8L2Q96SF2 557 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 TBCBQ99426 244 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 MEIS3Q99687 375 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 PIP5K1AQ99755 562 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 EIF2AK1Q9BQI3 630 aaKnown RBP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 LLPHQ9BRT6 129 aaKnown RBP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 FSD1Q9BTV5 496 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 TM6SF1Q9BZW5 370 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 SENP6Q9GZR1 1112 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 GHITMQ9H3K2 345 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 STN1Q9H668 368 aaKnown RBP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 TDRD3Q9H7E2 651 aaKnown RBP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 C10orf88Q9H8K7 445 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 PLGRKTQ9HBL7 147 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 KCNMB3Q9NPA1 279 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 ETNK2Q9NVF9 386 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 INTS10Q9NVR2 710 aaKnown RBP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 MCM9Q9NXL9 1143 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 FOXJ2Q9P0K8 574 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 NFKBIL1Q9UBC1 381 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 FETUBQ9UGM5 382 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 PCDHA12Q9UN75 941 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 RPL26L1Q9UNX3 145 aaKnown RBP4.45□□□□□ -1.7
ATXN3-227ENST00000554491 ERVK-19Q9WJR5 959 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 TBC1D30Q9Y2I9 924 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 TRPV2Q9Y5S1 764 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 WDFY4Q6ZS81 3184 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 CHD7Q9P2D1 2997 aa4.45□□□□□ -1.7
ATXN3-227ENST00000554491 A0A087X0B3 334 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-227ENST00000554491 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-227ENST00000554491 FUOMA2VDF0 154 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 MYADML2A6NDP7 307 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 OR5K3A6NET4 321 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 TRPC5OSA6NMA1 111 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 PRSS44E7EML9 344 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 E7EVH7 732 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 SLCO1B7G3V0H7 640 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 TRIM77I1YAP6 450 aa4.44□□□□□ -1.7
ATXN3-227ENST00000554491 IKBKBO14920 756 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms