RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 PCDH15Q96QU1 1955 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 ANAPC1Q9H1A4 1944 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 C1orf232A0A0U1RR37 186 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 RNF103-CHMP3A0A140T963 221 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 IQANK1A0A1B0GTG1 560 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 WDR27A2RRH5 827 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 MYBPHLA2RUH7 354 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 PCP4L1A6NKN8 68 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 TARM1B6A8C7 271 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 H7C4K7 107 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 RNF103O00237 685 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 VILLO15195 856 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 CHADO15335 359 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 SLC37A4O43826 429 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 GPRIN2O60269 458 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 MOSPD3O75425 235 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 PPM1BO75688 479 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 CSTAP01040 98 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 IGHEP01854 428 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 APOEP02649 317 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 ASLP04424 464 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 FHP07954 510 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 NR2F1P10589 423 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 UMPSP11172 480 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 CHRNB1P11230 501 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 PRKCAP17252 672 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 PFKLP17858 780 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 CYP3A5P20815 502 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 SLC5A2P31639 672 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 ADD1P35611 737 aaKnown RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 IGFALSP35858 605 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 SERPINF1P36955 418 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 NAMPTP43490 491 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 RARRES1P49788 294 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 ERFP50548 548 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 ARSEP51690 589 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 YWHAZP63104 245 aaKnown RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 IL24Q13007 206 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 DUSP4Q13115 394 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 TOB2Q14106 344 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 PSMD5Q16401 504 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 NFIL3Q16649 462 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 UPP1Q16831 310 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 ST3GAL2Q16842 350 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 PPM1LQ5SGD2 360 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 C10orf120Q5SQS8 335 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 TEX35Q5T0J7 233 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 ATPAF1Q5TC12 328 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 NDUFAF5Q5TEU4 345 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF658Q5TYW1 1059 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 SHEQ5VZ18 495 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 TMEM270Q6UE05 265 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 Q6ZUG5 572 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 USP49Q70CQ1 688 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 NEK8Q86SG6 692 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 PRPF39Q86UA1 669 aaKnown RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 KBTBD6Q86V97 674 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 MFN1Q8IWA4 741 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 CHERPQ8IWX8 916 aaKnown RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 KRT78Q8N1N4 520 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 MINDY1Q8N5J2 469 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 ZNF248Q8NDW4 579 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 HIPK4Q8NE63 616 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 MCPH1Q8NEM0 835 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 CLHC1Q8NHS4 586 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 ASAP3Q8TDY4 903 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 KAT2AQ92830 837 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 FGF13Q92913 245 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 FGF14Q92915 247 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 BRF1Q92994 677 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 C19orf60Q96EN9 201 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 RNF125Q96EQ8 232 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 OR1F2PQ96R84 312 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 FRMD8Q9BZ67 464 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 CEP44Q9C0F1 390 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 NXF3Q9H4D5 531 aaKnown RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 C17orf75Q9HAS0 396 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 PARD6AQ9NPB6 346 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 GMIPQ9P107 970 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 VPS18Q9P253 973 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 DNMT3BQ9UBC3 853 aaKnown RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 GMEB2Q9UKD1 530 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 TMPRSS11EQ9UL52 423 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 CORO1CQ9ULV4 474 aaPredicted RBP2.72□□□□□ -1.97
PRPF39-206ENST00000554429 CA14Q9ULX7 337 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 PCDHB14Q9Y5E9 798 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 R4GN57 208 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 VCANP13611 3396 aa2.72□□□□□ -1.97
PRPF39-206ENST00000554429 FAM186AA6NE01 2351 aa2.71□□□□□ -1.97
PRPF39-206ENST00000554429 ZDBF2Q9HCK1 2354 aa2.71□□□□□ -1.97
PRPF39-206ENST00000554429 TRAV20A0A0B4J274 112 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 LOC100653049A0A140TA62 436 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 A0A1W2PPW3 197 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 TMEM120BA0PK00 339 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 MFSD2BA6NFX1 497 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 FAM170BA6NMN3 283 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 KPNA7A9QM74 516 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 E9PMD0 336 aa2.71□□□□□ -1.98
PRPF39-206ENST00000554429 H3BUI4 141 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms