RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 FBXO5Q9UKT4 447 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 XYLBO75191 536 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 SNAI1O95863 264 aaPredicted RBP16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 HLA-DQB2P05538 268 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 FCGR1AP12314 374 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 HSD17B1P14061 328 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 CLCNKBP51801 687 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 BEX3Q00994 111 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 POLD3Q15054 466 aaPredicted RBP16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 SDHAF4Q5VUM1 108 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 PKN3Q6P5Z2 889 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 CYP2U1Q7Z449 544 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 AFAP1L2Q8N4X5 818 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 Q8N9G6 341 aaPredicted RBP16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 PDZD8Q8NEN9 1154 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 PPTC7Q8NI37 304 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 SCUBE2Q9NQ36 999 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 POLE4Q9NR33 117 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 IPPQ9Y573 584 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 SBF1O95248 1867 aa16.87■□□□□ 0.29
PPP4R3A-202ENST00000554390 A0A0J9YYE9 177 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 H0Y858 1186 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 PSMD11O00231 422 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 PTGESO14684 152 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 SLC25A27O95847 323 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 BNIP2Q12982 314 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 DCAF4L1Q3SXM0 396 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 NAPEPLDQ6IQ20 393 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 DENND5AQ6IQ26 1287 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 ALKAL1Q6UXT8 129 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 CYHR1Q6ZMK1 362 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 SLC16A12Q6ZSM3 486 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 ARMCX6Q7L4S7 300 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 R3HCC1LQ7Z5L2 792 aaKnown RBP16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 SLCO6A1Q86UG4 719 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 SPARTQ8N0X7 666 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 SENP8Q96LD8 212 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 HOPXQ9BPY8 73 aaPredicted RBP16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 TLR9Q9NR96 1032 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 RBM22Q9NW64 420 aaKnown RBP eCLIP16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 IFT52Q9Y366 437 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 CTSHP09668 335 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 ALDOCP09972 364 aaKnown RBP16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 CPB1P15086 417 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 ATP5F1P24539 256 aaPredicted RBP16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 HTR1BP28222 390 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 NEK2P51955 445 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 STX1BP61266 288 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 SEMA3BQ13214 749 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 CAMK2BQ13554 666 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 PSMD5Q16401 504 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 KYAT1Q16773 422 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 PLEKHG7Q6ZR37 379 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 RAVER1Q8IY67 606 aaKnown RBP16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 B3GALT6Q96L58 329 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 GAD1Q99259 594 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 SLC39A8Q9C0K1 460 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 INTS10Q9NVR2 710 aaKnown RBP16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 GPIP06744 558 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 MMP3P08254 477 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 GSTM2P28161 218 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 PIGFQ07326 219 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 CARTPTQ16568 116 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 TMEM207Q6UWW9 146 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 VASH1Q7L8A9 365 aaPredicted RBP16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 DPP9Q86TI2 863 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 LINC00523Q86TU6 105 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 ITIH5Q86UX2 942 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 MAGED4Q96JG8 741 aa16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 MRPL57Q9BQC6 102 aaKnown RBP16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 RCOR3Q9P2K3 495 aaPredicted RBP16.86■□□□□ 0.29
PPP4R3A-202ENST00000554390 NRCAMQ92823 1304 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 H0YAE9 185 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 IL7RP16871 459 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 GPX3P22352 226 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 CRHBPP24387 322 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 NPY2RP49146 381 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 ARSDP51689 593 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 NKX2-5P52952 324 aaPredicted RBP16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 DNAJB13P59910 316 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 CLCQ05315 142 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 GRB7Q14451 532 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 MAPK11Q15759 364 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 LARP4Q71RC2 724 aaKnown RBP eCLIP16.85■□□□□ 0.291e-6■■■□□ 19.2
PPP4R3A-202ENST00000554390 ATPAF2Q8N5M1 289 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 GOLM1Q8NBJ4 401 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 SLC2A13Q96QE2 648 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 HBEGFQ99075 208 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 EML4Q9HC35 981 aaKnown RBP16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 IGSF5Q9NSI5 407 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 MIOSQ9NXC5 875 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 GMIPQ9P107 970 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 MAGEB16A2A368 324 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 NCF1BA6NI72 391 aaPredicted RBP16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 NCF1CA8MVU1 366 aaPredicted RBP16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 H3BMM5 538 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 LDLRP01130 860 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 SMIM10L2AP0DMW4 78 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 SMIM10L2BP0DMW5 78 aa16.85■□□□□ 0.29
PPP4R3A-202ENST00000554390 NCF1P14598 390 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms