RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 NPIPB5A8MRT5 1133 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 C19orf81C9J6K1 198 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 NPIPB4C9JG80 1138 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 J3KR12 359 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 UBE2CO00762 179 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 CTDSP2O14595 271 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 ADAM20O43506 726 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 CCNT1O60563 726 aaKnown RBP2.33□□□□□ -2.04
SRP54-204ENST00000553923 B3GALNT1O75752 331 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 PGM3O95394 542 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 METTL18O95568 372 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 MMP3P08254 477 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 CYP21A2P08686 494 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 FAM200BP0CF97 657 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 SCG2P13521 617 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 STMN1P16949 149 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 MCM3P25205 808 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 EEF1DP29692 281 aaKnown RBP2.33□□□□□ -2.04
SRP54-204ENST00000553923 TLX1P31314 330 aaPredicted RBP2.33□□□□□ -2.04
SRP54-204ENST00000553923 KIF5BP33176 963 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 PBX3P40426 434 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 GARSP41250 739 aaKnown RBP2.33□□□□□ -2.04
SRP54-204ENST00000553923 MMP14P50281 582 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 MRPL12P52815 198 aaKnown RBP2.33□□□□□ -2.04
SRP54-204ENST00000553923 LINC01547P58512 204 aaPredicted RBP2.33□□□□□ -2.04
SRP54-204ENST00000553923 BPIFB3P59826 476 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 BFSP1Q12934 665 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 ZNF674Q2M3X9 581 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 TMEM30BQ3MIR4 351 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 ACCSLQ4AC99 568 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 SLC10A5Q5PT55 438 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 CBWD5Q5RIA9 395 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 NAA35Q5VZE5 725 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 TMEM268Q5VZI3 342 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 BSPRYQ5W0U4 402 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 TTI2Q6NXR4 508 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 KLHL35Q6PF15 583 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 C19orf48Q6RUI8 117 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 SDCCAG8Q86SQ7 713 aaPredicted RBP2.33□□□□□ -2.04
SRP54-204ENST00000553923 LCA5Q86VQ0 697 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 WDR5BQ86VZ2 330 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 ERC1Q8IUD2 1116 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 LINC00346Q8IVM7 164 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 SCN4BQ8IWT1 228 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 KIAA2013Q8IYS2 634 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 TRIML1Q8N9V2 468 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 POMGNT2Q8NAT1 580 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 Q8NFD4 153 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 OR8H1Q8NGG4 311 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 SLC2A12Q8TD20 617 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 C2CD4CQ8TF44 421 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 NOC3LQ8WTT2 800 aaKnown RBP2.33□□□□□ -2.04
SRP54-204ENST00000553923 MRPS27Q92552 414 aaKnown RBP2.33□□□□□ -2.04
SRP54-204ENST00000553923 SECISBP2LQ93073 1101 aaKnown RBP2.33□□□□□ -2.04
SRP54-204ENST00000553923 SMARCE1Q969G3 411 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 ARRDC3Q96B67 414 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 SAT2Q96F10 170 aaPredicted RBP2.33□□□□□ -2.04
SRP54-204ENST00000553923 CCDC43Q96MW1 224 aaKnown RBP2.33□□□□□ -2.04
SRP54-204ENST00000553923 CMTM3Q96MX0 182 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 ABHD1Q96SE0 405 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 CD180Q99467 661 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 FSD1Q9BTV5 496 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 HERC2P3Q9BVR0 1158 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 PHF7Q9BWX1 381 aaPredicted RBP2.33□□□□□ -2.04
SRP54-204ENST00000553923 CADM1Q9BY67 442 aaKnown RBP2.33□□□□□ -2.04
SRP54-204ENST00000553923 EDEM3Q9BZQ6 932 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 TAOK3Q9H2K8 898 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 MMADHCQ9H3L0 296 aaPredicted RBP2.33□□□□□ -2.04
SRP54-204ENST00000553923 CXorf56Q9H5V9 222 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 SLC35C2Q9NQQ7 365 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 TLR8Q9NR97 1041 aaKnown RBP2.33□□□□□ -2.04
SRP54-204ENST00000553923 DDX43Q9NXZ2 648 aaKnown RBP2.33□□□□□ -2.04
SRP54-204ENST00000553923 EHD2Q9NZN4 543 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 POU2F3Q9UKI9 436 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 FLT1P17948 1338 aa2.33□□□□□ -2.04
SRP54-204ENST00000553923 CACNA1FO60840 1977 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 hCG_1809904A0A1W2PP81 198 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 A0A1W2PPE2 198 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 A0A1W2PR64 198 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 ARHGEF37A1IGU5 675 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 URADA6NGE7 173 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 DDTLA6NHG4 134 aaPredicted RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 LIPT2A6NK58 231 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 KDM4EB2RXH2 506 aaPredicted RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 HNRNPCL2B2RXH8 293 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 EIF3CLB5ME19 914 aaKnown RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 FAM72CH0Y354 149 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 TIMM23O14925 209 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 IPO8O15397 1037 aaKnown RBP2.32□□□□□ -2.04
SRP54-204ENST00000553923 FGF17O60258 216 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 ENTPD3O75355 529 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 GOSR1O95249 250 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 DDAH2O95865 285 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 FTCDO95954 541 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 SLC4A1P02730 911 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 MT-ND3P03897 115 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 RNF224P0DH78 156 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 NR2F1P10589 423 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 LYL1P12980 280 aa2.32□□□□□ -2.04
SRP54-204ENST00000553923 CYP4B1P13584 511 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms