RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 LONRF1Q17RB8 773 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 HNRNPA1L2Q32P51 320 aaKnown RBP14.45□□□□□ -0.1
SHMT2-208ENST00000553868 HSF5Q4G112 596 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-208ENST00000553868 UBAP2Q5T6F2 1119 aaKnown RBP14.45□□□□□ -0.1
SHMT2-208ENST00000553868 PDPK2PQ6A1A2 396 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 SERPINA13PQ6UXR4 307 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 GDPD4Q6W3E5 623 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 TAOK1Q7L7X3 1001 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 PRICKLE2Q7Z3G6 844 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 DSG4Q86SJ6 1040 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 TDRPQ86YL5 185 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 CAMK1DQ8IU85 385 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 SPACA3Q8IXA5 215 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 OR2A12Q8NGT7 310 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 SNIP1Q8TAD8 396 aaKnown RBP14.45□□□□□ -0.1
SHMT2-208ENST00000553868 BLOC1S5Q8TDH9 187 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 SPOCK2Q92563 424 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 PGM2Q96G03 612 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 CERS2Q96G23 380 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 CENPHQ9H3R5 247 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 SUV39H2Q9H5I1 410 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 TMBIM4Q9HC24 238 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 PPANQ9NQ55 473 aaKnown RBP14.45□□□□□ -0.1
SHMT2-208ENST00000553868 CHRAC1Q9NRG0 131 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 NSMCE4AQ9NXX6 385 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 MOCS1Q9NZB8 636 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.45□□□□□ -0.1
SHMT2-208ENST00000553868 VPS18Q9P253 973 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 THAP10Q9P2Z0 257 aaPredicted RBP14.45□□□□□ -0.1
SHMT2-208ENST00000553868 SUN2Q9UH99 717 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 IL36AQ9UHA7 158 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 HCN2Q9UL51 889 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 PHTF1Q9UMS5 762 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 STARD13Q9Y3M8 1113 aa14.45□□□□□ -0.1
SHMT2-208ENST00000553868 TMEM131Q92545 1883 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 A0A1B0GTW7 788 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 A0A1W2PQF6 199 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 FAM159BA6NKW6 160 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 SMIM23A6NLE4 172 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 C2orf81A6NN90 581 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 HMGB1P1B2RPK0 211 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-208ENST00000553868 POC1B-GALNT4F8VUJ3 575 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 TNFSF14O43557 240 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 PIGNO95427 931 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 CER1O95813 267 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 PRNPP04156 253 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 INHBAP08476 426 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 ZNF883P0CG24 379 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 HOXB2P14652 356 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 JUPP14923 745 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 ZNF234Q14588 700 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 TAF1AQ15573 450 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-208ENST00000553868 QPCTQ16769 361 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 SKIDA1Q1XH10 827 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 TSTD2Q5T7W7 516 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 LGSNQ5TDP6 509 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 AGBL2Q5U5Z8 902 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 KIAA0930Q6ICG6 404 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-208ENST00000553868 BRAT1Q6PJG6 821 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 GLT6D1Q7Z4J2 308 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 LRRC6Q86X45 466 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 CTAGE3PQ8IX95 158 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 KCNV2Q8TDN2 545 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 HCAR2Q8TDS4 363 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 EPS8L3Q8TE67 593 aaKnown RBP14.44□□□□□ -0.1
SHMT2-208ENST00000553868 STYXQ8WUJ0 223 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 OR8D1Q8WZ84 308 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 CPNE5Q9HCH3 593 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 MAGEE1Q9HCI5 957 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 TXNDC16Q9P2K2 825 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 PSMC3IPQ9P2W1 217 aaPredicted RBP14.44□□□□□ -0.1
SHMT2-208ENST00000553868 MYLKQ15746 1914 aa14.44□□□□□ -0.1
SHMT2-208ENST00000553868 ZCWPW2A0A1B0GU75 182 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 MROH6A6NGR9 719 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 MEI4A8MW99 385 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 TRAFD1O14545 582 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-208ENST00000553868 PDHA1P08559 390 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 NMBRP28336 390 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 SERPINB9P50453 376 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 ILF2Q12905 390 aaKnown RBP14.43□□□□□ -0.1
SHMT2-208ENST00000553868 MSLNQ13421 630 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-208ENST00000553868 ELAVL3Q14576 367 aaKnown RBP14.43□□□□□ -0.1
SHMT2-208ENST00000553868 KBTBD12Q3ZCT8 623 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 WDR45BQ5MNZ6 344 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 ARHGAP40Q5TG30 622 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 USP45Q70EL2 814 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 TRMT11Q7Z4G4 463 aaKnown RBP14.43□□□□□ -0.1
SHMT2-208ENST00000553868 SLC26A11Q86WA9 606 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 TMPRSS12Q86WS5 348 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 PPM1NQ8N819 430 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 ZNF513Q8N8E2 541 aaPredicted RBP14.43□□□□□ -0.1
SHMT2-208ENST00000553868 CALML6Q8TD86 181 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 PIH1D2Q8WWB5 315 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 SLC44A1Q8WWI5 657 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 ECHDC3Q96DC8 303 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 MFSD3Q96ES6 412 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 NAF1Q96HR8 494 aaKnown RBP14.43□□□□□ -0.1
SHMT2-208ENST00000553868 NSMCE3Q96MG7 304 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 PAFAH2Q99487 392 aa14.43□□□□□ -0.1
SHMT2-208ENST00000553868 FAM167BQ9BTA0 163 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms