RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 PCDHB8Q9UN66 801 aa6.9□□□□□ -1.31
LINC-ROR-201ENST00000553704 PRG3Q9Y2Y8 225 aaPredicted RBP6.9□□□□□ -1.31
LINC-ROR-201ENST00000553704 Q9Y3F1 56 aa6.9□□□□□ -1.31
LINC-ROR-201ENST00000553704 GPR45Q9Y5Y3 372 aa6.9□□□□□ -1.31
LINC-ROR-201ENST00000553704 OAS3Q9Y6K5 1087 aaKnown RBP6.9□□□□□ -1.31
LINC-ROR-201ENST00000553704 A0A0J9YVX5 310 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 GLTPD2A6NH11 291 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 EI24O14681 340 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 BAIAP3O94812 1187 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 CELF2O95319 508 aaKnown RBP6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 MATN4O95460 622 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 FGF4P08620 206 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 RPS17P08708 135 aaKnown RBP6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 LBPP18428 481 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 TYMPP19971 482 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 VARSP26640 1264 aaKnown RBP6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 FMO4P31512 558 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 CDK9P50750 372 aaKnown RBP6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 CCT8P50990 548 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 GALK1P51570 392 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 SH3BGRP55822 239 aaPredicted RBP6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 UFM1P61960 85 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 CLCQ05315 142 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 TNK2Q07912 1038 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 IL10RBQ08334 325 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 TRIM32Q13049 653 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 TYSND1Q2T9J0 566 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 IRAK1BP1Q5VVH5 260 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 BLOC1S3Q6QNY0 202 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 ZNF598Q86UK7 904 aaKnown RBP6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 MON1AQ86VX9 555 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 KIAA2013Q8IYS2 634 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 MINDY1Q8N5J2 469 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 MFSD2AQ8NA29 543 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 GPR150Q8NGU9 434 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 OR4L1Q8NH43 312 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 ZUFSPQ96AP4 578 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 FEM1CQ96JP0 617 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 MYRFLQ96LU7 910 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 TRIB3Q96RU7 358 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 ACOX2Q99424 681 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 EFHD1Q9BUP0 239 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 POLR1EQ9GZS1 481 aaKnown RBP6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 CRISPLD1Q9H336 500 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 PIF1Q9H611 641 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 CLK4Q9HAZ1 481 aaKnown RBP6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 MRGBPQ9NV56 204 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 INTS7Q9NVH2 962 aaKnown RBP6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 FNIP2Q9P278 1114 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 CDC14AQ9UNH5 594 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 NDUFAF1Q9Y375 327 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 AQP12BA6NM10 295 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 INPP4BO15327 924 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 PRAMEF11O60813 436 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 KERAO60938 352 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 DUSP11O75319 330 aaKnown RBP6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 RHOBTB1O94844 696 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 C1RP00736 705 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 FGF1P05230 155 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 PRR35P0CG20 571 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 HSPA8P11142 646 aaKnown RBP6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 MYF6P23409 242 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 PSMA4P25789 261 aaKnown RBP6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 HOXD9P28356 352 aaPredicted RBP6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 IL12AP29459 219 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 OR1E1P30953 314 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 STT3AP46977 705 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 ZNF140P52738 457 aaPredicted RBP6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 HK3P52790 923 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 LCP2Q13094 533 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 RCAN2Q14206 197 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 ZNF235Q14590 738 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 TAF1CQ15572 869 aaPredicted RBP6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 AAK1Q2M2I8 961 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 TBC1D25Q3MII6 688 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 FUT11Q495W5 492 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 TIGD2Q4W5G0 525 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 CLLU1OSQ5K130 101 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 INTS11Q5TA45 600 aaKnown RBP6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 AQP12AQ8IXF9 295 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 FBXO39Q8N4B4 442 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 OR7D4Q8NG98 312 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 RHEBL1Q8TAI7 183 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 GABPB2Q8TAK5 448 aaPredicted RBP6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 CYP2S1Q96SQ9 504 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 HBEGFQ99075 208 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 GPR21Q99679 349 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 CCSER2Q9H7U1 834 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 AIG1Q9NVV5 245 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 GALNT8Q9NY28 637 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 ACTR3BQ9P1U1 418 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 TSR3Q9UJK0 312 aaKnown RBP6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 RNF112Q9ULX5 631 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 SQORQ9Y6N5 450 aa6.89□□□□□ -1.31
LINC-ROR-201ENST00000553704 SLC12A8A0AV02 714 aa6.88□□□□□ -1.31
LINC-ROR-201ENST00000553704 TRIM64CA6NLI5 447 aa6.88□□□□□ -1.31
LINC-ROR-201ENST00000553704 MAGEB3O15480 346 aa6.88□□□□□ -1.31
LINC-ROR-201ENST00000553704 OR1I1O60431 355 aa6.88□□□□□ -1.31
LINC-ROR-201ENST00000553704 NIPSNAP2O75323 286 aa6.88□□□□□ -1.31
LINC-ROR-201ENST00000553704 BMP10O95393 424 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms