RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ARIH2O95376 493 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 OAS1P00973 400 aaKnown RBP8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 SNRPA1P09661 255 aaKnown RBP8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 ZNF250P15622 560 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 TCF3P15923 654 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 TALDO1P37837 337 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 ROR1Q01973 937 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 TP53BP2Q13625 1128 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 MSANTD2Q6P1R3 559 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 TMEM270Q6UE05 265 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 IL17REQ8NFR9 667 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 RBPMSQ93062 196 aaKnown RBP8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 ZFYVE1Q9HBF4 777 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 BEX1Q9HBH7 125 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 WHRNQ9P202 907 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 ZNHIT2Q9UHR6 403 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 MKLN1Q9UL63 735 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 MAGEA6P43360 314 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 ANTXR2P58335 489 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 N4BP2L1Q5TBK1 243 aaPredicted RBP8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 PRSS42Q7Z5A4 293 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 DPP9Q86TI2 863 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 RBM18Q96H35 190 aaKnown RBP8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 IFT27Q9BW83 186 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 NPLQ9BXD5 320 aaPredicted RBP8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 C1QTNF7Q9BXJ2 289 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 DCSTAMPQ9H295 470 aa8.97□□□□□ -0.97
GTF2A1-203ENST00000553612 TCRBV7S2A1N4TA0A589 114 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 CYB561D2O14569 222 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 ALDH2P05091 517 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 PRDX6P30041 224 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 DCDC1P59894 354 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 ATP6V0D1P61421 351 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 STX4Q12846 297 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 DIRAS2Q96HU8 199 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 C5orf34Q96MH7 638 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 RBCK1Q9BYM8 510 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 MIOXQ9UGB7 285 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 ACAD8Q9UKU7 415 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 MRPL42Q9Y6G3 142 aaKnown RBP8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 TRBV23OR9-2A0A075B6M9 112 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 PNMA6FA0A0J9YX94 578 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 CST8O60676 142 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 GGPS1O95749 300 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 URODP06132 367 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 TSPAN8P19075 237 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 ARCN1P48444 511 aaKnown RBP8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 HK3P52790 923 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 MEA1Q16626 185 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 KDELC1Q6UW63 502 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 FIBCD1Q8N539 461 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 MCOLN3Q8TDD5 553 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 SLC9A2Q9UBY0 812 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 TPRKBQ9Y3C4 175 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 STK36Q9NRP7 1315 aa8.96□□□□□ -0.97
GTF2A1-203ENST00000553612 SPDYE2BA6NHP3 402 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 SOBPA7XYQ1 873 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 ZNF99A8MXY4 864 aaPredicted RBP8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 B4GAT1O43505 415 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 ERN1O75460 977 aaKnown RBP8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 UPK1BO75841 260 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 SPDYE6P0CI01 402 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 MERTKQ12866 999 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 CAMK1Q14012 370 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 FASTKD3Q14CZ7 662 aaKnown RBP8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 ZNF181Q2M3W8 571 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 KHDRBS2Q5VWX1 349 aaKnown RBP8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 CGB2Q6NT52 195 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 PRMT9Q6P2P2 845 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 FBXO46Q6PJ61 603 aaPredicted RBP8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 PAMR1Q6UXH9 720 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 ATG9AQ7Z3C6 839 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 RAB44Q7Z6P3 723 aaPredicted RBP8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 ADGRF2Q8IZF7 708 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 MAML2Q8IZL2 1156 aaPredicted RBP8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 EIF1ADQ8N9N8 165 aaKnown RBP8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 OR4C6Q8NH72 309 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 RAD54LQ92698 747 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 ZNF845Q96IR2 970 aaPredicted RBP8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 RHOVQ96L33 236 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 ASPNQ9BXN1 380 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 BCL2L14Q9BZR8 327 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 FAM83DQ9H4H8 585 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 DHX33Q9H6R0 707 aaKnown RBP8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 RPH3ALQ9UNE2 315 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 SF3B1O75533 1304 aaKnown RBP eCLIP8.96□□□□□ -0.988e-6■■■■■ 107
GTF2A1-203ENST00000553612 ADGRL3Q9HAR2 1447 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 WASLO00401 505 aaPredicted RBP8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 TBX3O15119 743 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 TRIM3O75382 744 aaPredicted RBP8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 MSR1P21757 451 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 SPCS2Q15005 226 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 RETSATQ6NUM9 610 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 SCIMPQ6UWF3 145 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 PLCZ1Q86YW0 608 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 YIPF7Q8N8F6 280 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 KBTBD8Q8NFY9 601 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 ZNF512BQ96KM6 892 aaPredicted RBP8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 ASB14A6NK59 587 aa8.96□□□□□ -0.98
GTF2A1-203ENST00000553612 TERTO14746 1132 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms