RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 DIDO1Q9BTC0 2240 aaKnown RBP13.66□□□□□ -0.22
PRPF39-204ENST00000553605 KIR2DS5A0A0G2JLQ3 304 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 A0A0G2JNG1 304 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 PPP1R3GB7ZBB8 358 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 KIR2DS3K7RE56 304 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 PSMD11O00231 422 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 SNX2O60749 519 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 UBXN7O94888 489 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 SOD1P00441 154 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 PNMA6AP0CW24 399 aaPredicted RBP13.65□□□□□ -0.22
PRPF39-204ENST00000553605 CD44P16070 742 aaKnown RBP13.65□□□□□ -0.22
PRPF39-204ENST00000553605 AMD1P17707 334 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 SCNN1BP51168 640 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 BPIFB4P59827 614 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 KIR2DS5Q14953 304 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 SMYD5Q6GMV2 418 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 ISM2Q6H9L7 571 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 KLHL10Q6JEL2 608 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 PWWP2BQ6NUJ5 590 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 ADAMTSL4Q6UY14 1074 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 STRADAQ7RTN6 431 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 GLIS1Q8NBF1 620 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 MSANTD4Q8NCY6 345 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 ST6GALNAC3Q8NDV1 305 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 GPT2Q8TD30 523 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 ADAMTS17Q8TE56 1095 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 KLHL6Q8WZ60 621 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 SMARCE1Q969G3 411 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 NTAN1Q96AB6 310 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 NSMCE3Q96MG7 304 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 BARD1Q99728 777 aaKnown RBP13.65□□□□□ -0.22
PRPF39-204ENST00000553605 CINPQ9BW66 212 aaPredicted RBP13.65□□□□□ -0.22
PRPF39-204ENST00000553605 CATSPERBQ9H7T0 1116 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 TMEM63CQ9P1W3 806 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 C5AR2Q9P296 337 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 PRKAB1Q9Y478 270 aa13.65□□□□□ -0.22
PRPF39-204ENST00000553605 MTORP42345 2549 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 POLEQ07864 2286 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 OR5K4A6NMS3 321 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 F5H423 210 aaPredicted RBP13.64□□□□□ -0.23
PRPF39-204ENST00000553605 CREB3O43889 395 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 KIF1CO43896 1103 aaKnown RBP13.64□□□□□ -0.23
PRPF39-204ENST00000553605 DIAPH2O60879 1101 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 ASMTLO95671 621 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 CYP2A6P11509 494 aaPredicted RBP13.64□□□□□ -0.23
PRPF39-204ENST00000553605 F3P13726 295 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 LHCGRP22888 699 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 HNRNPH3P31942 346 aaKnown RBP13.64□□□□□ -0.23
PRPF39-204ENST00000553605 PPP1R2P41236 205 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 HDAC4P56524 1084 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 KRT85P78386 507 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 PDE1BQ01064 536 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 CRB2Q5IJ48 1285 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 CACHD1Q5VU97 1274 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 GBP6Q6ZN66 633 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 MED25Q71SY5 747 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 TECPR1Q7Z6L1 1165 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 SLFN11Q7Z7L1 901 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 AVL9Q8NBF6 648 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 UBE2Q2Q8WVN8 375 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 SPOCK2Q92563 424 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 CENPIQ92674 756 aaPredicted RBP13.64□□□□□ -0.23
PRPF39-204ENST00000553605 FCRL4Q96PJ5 515 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 ILKAPQ9H0C8 392 aaPredicted RBP13.64□□□□□ -0.23
PRPF39-204ENST00000553605 LRRC19Q9H756 370 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 UCK1Q9HA47 277 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 CD84Q9UIB8 345 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 AJAP1Q9UKB5 411 aaPredicted RBP13.64□□□□□ -0.23
PRPF39-204ENST00000553605 RARRES3Q9UL19 164 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 OSGIN2Q9Y236 505 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 KCNK6Q9Y257 313 aa13.64□□□□□ -0.23
PRPF39-204ENST00000553605 PCYT1BQ9Y5K3 369 aaPredicted RBP13.64□□□□□ -0.23
PRPF39-204ENST00000553605 PCNX1Q96RV3 2341 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 A0A1W2PQ67 120 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 BICDL2A1A5D9 508 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 DNAJC6O75061 913 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 CYP11B1P15538 503 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 NELFEP18615 380 aaKnown RBP13.63□□□□□ -0.23
PRPF39-204ENST00000553605 PTGER4P35408 488 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 GLRBP48167 497 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 PAPOLAP51003 745 aaKnown RBP13.63□□□□□ -0.23
PRPF39-204ENST00000553605 AP1S1P61966 158 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 RAPSNQ13702 412 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 TMCO4Q5TGY1 634 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 PRSS42Q7Z5A4 293 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 FAM71AQ8IYT1 594 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 ARFGAP1Q8N6T3 406 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 TMEM102Q8N9M5 508 aaPredicted RBP13.63□□□□□ -0.23
PRPF39-204ENST00000553605 FAM172AQ8WUF8 416 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 NELFBQ8WX92 580 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 CPA5Q8WXQ8 436 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 AP2M1Q96CW1 435 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 PLEKHG4BQ96PX9 1271 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 ABCG8Q9H221 673 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 AGPAT4Q9NRZ5 378 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 COPG2Q9UBF2 871 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 DNAJC12Q9UKB3 198 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 NTNG1Q9Y2I2 539 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 PCDHGC4Q9Y5F7 938 aa13.63□□□□□ -0.23
PRPF39-204ENST00000553605 SLC30A1Q9Y6M5 507 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms