RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 PLRG1O43660 514 aaKnown RBP5.16□□□□□ -1.58
SYNE2-210ENST00000553455 STX2P32856 288 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 APOBEC1P41238 236 aaKnown RBP5.16□□□□□ -1.58
SYNE2-210ENST00000553455 MSH2P43246 934 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 PLCD1P51178 756 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 ZNF81P51508 661 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 PPP5CP53041 499 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 HNRNPH2P55795 449 aaKnown RBP5.16□□□□□ -1.58
SYNE2-210ENST00000553455 CSNK2A1P68400 391 aaPredicted RBP5.16□□□□□ -1.58
SYNE2-210ENST00000553455 GRSF1Q12849 480 aaKnown RBP eCLIP5.16□□□□□ -1.58
SYNE2-210ENST00000553455 CDC16Q13042 620 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 TMEM266Q2M3C6 531 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 ADALQ6DHV7 355 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 LCN10Q6JVE6 187 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 DUS1LQ6P1R4 473 aaKnown RBP5.16□□□□□ -1.58
SYNE2-210ENST00000553455 EPHX4Q8IUS5 362 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 ARID3BQ8IVW6 561 aaPredicted RBP5.16□□□□□ -1.58
SYNE2-210ENST00000553455 PELI3Q8N2H9 469 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 MINDY1Q8N5J2 469 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 PCDH20Q8N6Y1 951 aaKnown RBP5.16□□□□□ -1.58
SYNE2-210ENST00000553455 CSNK2A3Q8NEV1 391 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 HM13Q8TCT9 377 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 DUSP19Q8WTR2 217 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 ASB5Q8WWX0 329 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 ZNF622Q969S3 477 aaKnown RBP eCLIP5.16□□□□□ -1.58
SYNE2-210ENST00000553455 TMCO6Q96DC7 493 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 ZNF48Q96MX3 618 aaPredicted RBP5.16□□□□□ -1.58
SYNE2-210ENST00000553455 CAMK1GQ96NX5 476 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 MRPL1Q9BYD6 325 aaKnown RBP5.16□□□□□ -1.58
SYNE2-210ENST00000553455 OSGEPL1Q9H4B0 414 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 NOX4Q9NPH5 578 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 CPSF2Q9P2I0 782 aaKnown RBP5.16□□□□□ -1.58
SYNE2-210ENST00000553455 STK39Q9UEW8 545 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 PADI3Q9ULW8 664 aa5.16□□□□□ -1.58
SYNE2-210ENST00000553455 H3BNX3 289 aa5.15□□□□□ -1.59
SYNE2-210ENST00000553455 SOCS6O14544 535 aa5.15□□□□□ -1.59
SYNE2-210ENST00000553455 DKC1O60832 514 aaKnown RBP eCLIP5.15□□□□□ -1.59
SYNE2-210ENST00000553455 AVILO75366 819 aa5.15□□□□□ -1.59
SYNE2-210ENST00000553455 PRLRP16471 622 aa5.15□□□□□ -1.59
SYNE2-210ENST00000553455 BDKRB2P30411 391 aa5.15□□□□□ -1.59
SYNE2-210ENST00000553455 HOXD3P31249 432 aaPredicted RBP5.15□□□□□ -1.59
SYNE2-210ENST00000553455 ARRB2P32121 409 aa5.15□□□□□ -1.59
SYNE2-210ENST00000553455 IRX6P78412 446 aaPredicted RBP5.15□□□□□ -1.59
SYNE2-210ENST00000553455 BNC1Q01954 994 aa5.15□□□□□ -1.59
SYNE2-210ENST00000553455 DECR1Q16698 335 aa5.15□□□□□ -1.59
SYNE2-210ENST00000553455 C15orf59Q2T9L4 293 aaPredicted RBP5.15□□□□□ -1.59
SYNE2-210ENST00000553455 AMZ1Q400G9 498 aa5.15□□□□□ -1.59
SYNE2-210ENST00000553455 ERMARDQ5T6L9 678 aa5.15□□□□□ -1.59
SYNE2-210ENST00000553455 KCTD18Q6PI47 426 aaPredicted RBP5.15□□□□□ -1.59
SYNE2-210ENST00000553455 ATG9AQ7Z3C6 839 aa5.15□□□□□ -1.59
SYNE2-210ENST00000553455 CHERPQ8IWX8 916 aaKnown RBP5.15□□□□□ -1.59
SYNE2-210ENST00000553455 SYT2Q8N9I0 419 aaPredicted RBP5.15□□□□□ -1.59
SYNE2-210ENST00000553455 AVL9Q8NBF6 648 aa5.15□□□□□ -1.59
SYNE2-210ENST00000553455 PTPMT1Q8WUK0 201 aaPredicted RBP5.15□□□□□ -1.59
SYNE2-210ENST00000553455 ORAI1Q96D31 301 aa5.15□□□□□ -1.59
SYNE2-210ENST00000553455 KXD1Q9BQD3 176 aa5.15□□□□□ -1.59
SYNE2-210ENST00000553455 SLC25A33Q9BSK2 321 aa5.15□□□□□ -1.59
SYNE2-210ENST00000553455 MMTAG2Q9BU76 263 aaKnown RBP5.15□□□□□ -1.59
SYNE2-210ENST00000553455 PSD3Q9NYI0 1048 aa5.15□□□□□ -1.59
SYNE2-210ENST00000553455 DNAJB4Q9UDY4 337 aa5.15□□□□□ -1.59
SYNE2-210ENST00000553455 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.15□□□□□ -1.59
SYNE2-210ENST00000553455 ZNF521Q96K83 1311 aa5.15□□□□□ -1.59
SYNE2-210ENST00000553455 TMEM8BA6NDV4 472 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 SPINT2O43291 252 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 PLPP2O43688 288 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 C21orf33P30042 268 aaPredicted RBP5.14□□□□□ -1.59
SYNE2-210ENST00000553455 FASLGP48023 281 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 TRAF3Q13114 568 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 MAD2L1Q13257 205 aaPredicted RBP5.14□□□□□ -1.59
SYNE2-210ENST00000553455 KYNUQ16719 465 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 MYLK3Q32MK0 819 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 SETMARQ53H47 684 aaPredicted RBP5.14□□□□□ -1.59
SYNE2-210ENST00000553455 IGSF11Q5DX21 431 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 DCST1Q5T197 706 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 C8orf82Q6P1X6 216 aaPredicted RBP5.14□□□□□ -1.59
SYNE2-210ENST00000553455 PLPPR4Q7Z2D5 763 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 RASGEF1CQ8N431 466 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 APPL2Q8NEU8 664 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 WFIKKN2Q8TEU8 576 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 NSMCE1Q8WV22 266 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 TAAR8Q969N4 342 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 MOAP1Q96BY2 351 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 HMCESQ96FZ2 354 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 RADILQ96JH8 1075 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 DGAT2Q96PD7 388 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 NUDCD1Q96RS6 583 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 SLC29A3Q9BZD2 475 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 DNAJC18Q9H819 358 aa5.14□□□□□ -1.59
SYNE2-210ENST00000553455 WBP11Q9Y2W2 641 aaKnown RBP5.14□□□□□ -1.59
SYNE2-210ENST00000553455 LOC100509620A0A075B734 347 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 GPR75-ASB3A0A0A6YYF3 556 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 hCG_1809904A0A1W2PP81 198 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 A0A1W2PPE2 198 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 A0A1W2PR64 198 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 hDV102S1A0JD36 115 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 EIF4E1BA6NMX2 242 aaKnown RBP5.13□□□□□ -1.59
SYNE2-210ENST00000553455 RSL1D1O76021 490 aaKnown RBP5.13□□□□□ -1.59
SYNE2-210ENST00000553455 SSTR2P30874 369 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 BRWD1-AS2P59051 145 aa5.13□□□□□ -1.59
SYNE2-210ENST00000553455 SEC61BP60468 96 aaKnown RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms