RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 ICE1Q9Y2F5 2266 aa9□□□□□ -0.97
SYNE2-209ENST00000553308 CDC14CA4D256 554 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 TMCO5BA8MYB1 307 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 PRPSAP2O60256 369 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 MAFKO60675 156 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 VPS4BO75351 444 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 KATNA1O75449 491 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 DNAJB5O75953 348 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 KIAA0754O94854 1291 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 ANKRD34CP0C6C1 535 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 F3P13726 295 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 AMPD1P23109 780 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 MMP13P45452 471 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 NOP2P46087 812 aaKnown RBP8.99□□□□□ -0.97
SYNE2-209ENST00000553308 HCAR3P49019 387 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 STC1P52823 247 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 PMS2P54278 862 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 SH3BP2P78314 561 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 PTSQ03393 145 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 PLEKHA7Q6IQ23 1121 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 C6orf15Q6UXA7 325 aaPredicted RBP8.99□□□□□ -0.97
SYNE2-209ENST00000553308 ZNF765Q7L2R6 523 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 SLC9B2Q86UD5 537 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 ATPAF2Q8N5M1 289 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 NEK11Q8NG66 645 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 EXD1Q8NHP7 514 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 SH3KBP1Q96B97 665 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 ELMO2Q96JJ3 720 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 PCMTD1Q96MG8 357 aaPredicted RBP8.99□□□□□ -0.97
SYNE2-209ENST00000553308 HERPUD2Q9BSE4 406 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 ZWILCHQ9H900 591 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 NT5MQ9NPB1 228 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 OGFRQ9NZT2 677 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 VPS18Q9P253 973 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 VPS4AQ9UN37 437 aa8.99□□□□□ -0.97
SYNE2-209ENST00000553308 USP9XQ93008 2570 aaPredicted RBP8.99□□□□□ -0.97
SYNE2-209ENST00000553308 TEX15Q9BXT5 2789 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 A0A0J9YYE9 177 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 A1L4Q6 167 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 TMEM191CA6NGB0 347 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 LILRA5A6NI73 299 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 TTLL8A6PVC2 850 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 FADS2P1A8MWK0 482 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 H3BRJ5 948 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 FZD6O60353 706 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 SEMA7AO75326 666 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 LRCH4O75427 683 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 RNF8O76064 485 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 NDUFA10O95299 355 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 TRBC1P01850 177 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 C9P02748 559 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 PYGLP06737 847 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 TPM2P07951 284 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 TCF4P15884 667 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 ZNF30P17039 623 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 TYRP1P17643 537 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 IL1R2P27930 398 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 LEPRP48357 1165 aaKnown RBP8.98□□□□□ -0.97
SYNE2-209ENST00000553308 SEPHS1P49903 392 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 IHHQ14623 411 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 SMTNL2Q2TAL5 461 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 RALGPS1Q5JS13 557 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 FHL5Q5TD97 284 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 MARC1Q5VT66 337 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 TMCO3Q6UWJ1 677 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 LYSMD3Q7Z3D4 306 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 NLRP8Q86W28 1048 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 PLXDC1Q8IUK5 500 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 PSTKQ8IV42 348 aaKnown RBP8.98□□□□□ -0.97
SYNE2-209ENST00000553308 BBS5Q8N3I7 341 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.98□□□□□ -0.97
SYNE2-209ENST00000553308 EFCAB3Q8N7B9 438 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 ENOX1Q8TC92 643 aaKnown RBP8.98□□□□□ -0.97
SYNE2-209ENST00000553308 CPT1CQ8TCG5 803 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 SSC4DQ8WTU2 575 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 STAMBPL1Q96FJ0 436 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 C9orf72Q96LT7 481 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 TGM7Q96PF1 710 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 OR6C1Q96RD1 312 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 WDR24Q96S15 920 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 SYT11Q9BT88 431 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 TRIM55Q9BYV6 548 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.98□□□□□ -0.97
SYNE2-209ENST00000553308 TWSG1Q9GZX9 223 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 EPB41L1Q9H4G0 881 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 PARVAQ9NVD7 372 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 RCOR3Q9P2K3 495 aaPredicted RBP8.98□□□□□ -0.97
SYNE2-209ENST00000553308 CPNE7Q9UBL6 633 aa8.98□□□□□ -0.97
SYNE2-209ENST00000553308 CNOT6Q9ULM6 557 aaKnown RBP8.98□□□□□ -0.97
SYNE2-209ENST00000553308 TNRC6AQ8NDV7 1962 aaKnown RBP8.98□□□□□ -0.97
SYNE2-209ENST00000553308 KIR2DS5A0A0G2JLQ3 304 aa8.97□□□□□ -0.97
SYNE2-209ENST00000553308 A0A0G2JNG1 304 aa8.97□□□□□ -0.97
SYNE2-209ENST00000553308 PIPSLA2A3N6 862 aa8.97□□□□□ -0.97
SYNE2-209ENST00000553308 LGALS16A8MUM7 142 aa8.97□□□□□ -0.97
SYNE2-209ENST00000553308 KIR2DS3K7RE56 304 aa8.97□□□□□ -0.97
SYNE2-209ENST00000553308 CREG1O75629 220 aa8.97□□□□□ -0.97
SYNE2-209ENST00000553308 CLDN7O95471 211 aa8.97□□□□□ -0.97
SYNE2-209ENST00000553308 SLC2A4P14672 509 aa8.97□□□□□ -0.97
SYNE2-209ENST00000553308 ARL4AP40617 200 aa8.97□□□□□ -0.97
SYNE2-209ENST00000553308 ZNF135P52742 658 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms