RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 CCDC69A6NI79 296 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 CGB1A6NKQ9 187 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 PRAMEF11O60813 436 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 PPFIA2O75334 1257 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 MOSPD3O75425 235 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 NDUFB4O95168 129 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 WNT1P04628 370 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 ICAM1P05362 532 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 C8AP07357 584 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 DESP17661 470 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 CD58P19256 250 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 GPTP24298 496 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 NR2F2P24468 414 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 PTPN3P26045 913 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 ADRA1BP35368 520 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 HSF1Q00613 529 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 LPIN1Q14693 890 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 TWISTNBQ3B726 338 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-208ENST00000553278 LEXMQ3ZCV2 418 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 ENTPD8Q5MY95 495 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 C6orf136Q5SQH8 315 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 GBP6Q6ZN66 633 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 RNF207Q6ZRF8 634 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 C11orf57Q6ZUT1 292 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-208ENST00000553278 DSG4Q86SJ6 1040 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 FBXO39Q8N4B4 442 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 HORMAD2Q8N7B1 307 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 SPATA20Q8TB22 786 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 RITA1Q96K30 269 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 PIMREGQ9BSJ6 248 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 FSD1Q9BTV5 496 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 ABHD6Q9BV23 337 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 UTP14AQ9BVJ6 771 aaKnown RBP5.79□□□□□ -1.48
SCFD1-208ENST00000553278 KRTAP4-11Q9BYQ6 195 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 LHPPQ9H008 270 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 THAP9Q9H5L6 903 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 MAGIXQ9H6Y5 334 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 HINT3Q9NQE9 182 aaKnown RBP5.79□□□□□ -1.48
SCFD1-208ENST00000553278 CYSLTR2Q9NS75 346 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 CISD1Q9NZ45 108 aaKnown RBP5.79□□□□□ -1.48
SCFD1-208ENST00000553278 AKAP7Q9P0M2 348 aaPredicted RBP5.79□□□□□ -1.48
SCFD1-208ENST00000553278 OR14J1Q9UGF5 321 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 UTS2RQ9UKP6 389 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 AGTPBP1Q9UPW5 1226 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 NFE2L3Q9Y4A8 694 aa5.79□□□□□ -1.48
SCFD1-208ENST00000553278 OOEPA6NGQ2 149 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 TARM1B6A8C7 271 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 SLC33A1O00400 549 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-208ENST00000553278 CLIC2O15247 247 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 ASAP2O43150 1006 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 RTN2O75298 545 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 OR52Z1P0C646 297 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 MYZAPP0CAP1 466 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 CBSLP0DN79 551 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 P4HA1P13674 534 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 ENO3P13929 434 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-208ENST00000553278 EEF1B2P24534 225 aaKnown RBP5.78□□□□□ -1.48
SCFD1-208ENST00000553278 CBSP35520 551 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 ZNF75DP51815 510 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 STX1BP61266 288 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 MZT1Q08AG7 82 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 FAM27E3Q08E93 113 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 TEFQ10587 303 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 TUBA3CQ13748 450 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 ZNF169Q14929 603 aaPredicted RBP5.78□□□□□ -1.48
SCFD1-208ENST00000553278 RRS1Q15050 365 aaKnown RBP5.78□□□□□ -1.48
SCFD1-208ENST00000553278 PPA1Q15181 289 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 FAM98BQ52LJ0 330 aaKnown RBP5.78□□□□□ -1.48
SCFD1-208ENST00000553278 DPY19L2P1Q6NXN4 242 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 TEX38Q6PEX7 206 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 TUBA3EQ6PEY2 450 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 Q6YL49 198 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 BTN2A1Q7KYR7 527 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 TRILQ7L0X0 811 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 DET1Q7L5Y6 550 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 CCDC190Q86UF4 302 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 DDIASQ8IXT1 998 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 TIGD4Q8IY51 512 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 ARL6IP6Q8N6S5 226 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 SLC4A11Q8NBS3 891 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 PSMA8Q8TAA3 256 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 ZNF398Q8TD17 642 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 ROBO4Q8WZ75 1007 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 EXT2Q93063 718 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 NXNL1Q96CM4 212 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 PDLIM5Q96HC4 596 aaKnown RBP5.78□□□□□ -1.48
SCFD1-208ENST00000553278 SMC6Q96SB8 1091 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 DDOQ99489 341 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 TMEM79Q9BSE2 394 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 SCNM1Q9BWG6 230 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 SLC5A7Q9GZV3 580 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 TNMDQ9H2S6 317 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 MRPL44Q9H9J2 332 aaKnown RBP5.78□□□□□ -1.48
SCFD1-208ENST00000553278 PARD6AQ9NPB6 346 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 PDRG1Q9NUG6 133 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 TRMT1Q9NXH9 659 aaKnown RBP5.78□□□□□ -1.48
SCFD1-208ENST00000553278 HEY2Q9UBP5 337 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 TMCC3Q9ULS5 477 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 NFS1Q9Y697 457 aa5.78□□□□□ -1.48
SCFD1-208ENST00000553278 SALL3Q9BXA9 1300 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms