RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 PQLC2Q6ZP29 291 aa4.96□□□□□ -1.62
LIMA1-205ENST00000550592 CFAP77Q6ZQR2 320 aa4.96□□□□□ -1.62
LIMA1-205ENST00000550592 COLCA1Q6ZS62 124 aa4.96□□□□□ -1.62
LIMA1-205ENST00000550592 TSPAN33Q86UF1 283 aa4.96□□□□□ -1.62
LIMA1-205ENST00000550592 PIM3Q86V86 326 aa4.96□□□□□ -1.62
LIMA1-205ENST00000550592 SPATA6LQ8N4H0 392 aa4.96□□□□□ -1.62
LIMA1-205ENST00000550592 AADATQ8N5Z0 425 aa4.96□□□□□ -1.62
LIMA1-205ENST00000550592 HJURPQ8NCD3 748 aaPredicted RBP4.96□□□□□ -1.62
LIMA1-205ENST00000550592 ELMOD3Q96FG2 381 aa4.96□□□□□ -1.62
LIMA1-205ENST00000550592 METTL2AQ96IZ6 378 aaKnown RBP4.96□□□□□ -1.62
LIMA1-205ENST00000550592 ACOX2Q99424 681 aa4.96□□□□□ -1.62
LIMA1-205ENST00000550592 SH3GL2Q99962 352 aa4.96□□□□□ -1.62
LIMA1-205ENST00000550592 CENPOQ9BU64 300 aa4.96□□□□□ -1.62
LIMA1-205ENST00000550592 WDR26Q9H7D7 661 aa4.96□□□□□ -1.62
LIMA1-205ENST00000550592 ELOVL5Q9NYP7 299 aa4.96□□□□□ -1.62
LIMA1-205ENST00000550592 CFDP1Q9UEE9 299 aaPredicted RBP4.96□□□□□ -1.62
LIMA1-205ENST00000550592 RPS6KA6Q9UK32 745 aa4.96□□□□□ -1.62
LIMA1-205ENST00000550592 RPS6KL1Q9Y6S9 549 aa4.96□□□□□ -1.62
LIMA1-205ENST00000550592 RGPD1P0DJD0 1748 aa4.96□□□□□ -1.62
LIMA1-205ENST00000550592 GPATCH8Q9UKJ3 1502 aaKnown RBP4.96□□□□□ -1.62
LIMA1-205ENST00000550592 DCCP43146 1447 aa4.96□□□□□ -1.62
LIMA1-205ENST00000550592 GLI3P10071 1580 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 J3KR12 359 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 HSPA12AO43301 675 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 PLOD3O60568 738 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 ERAL1O75616 437 aaKnown RBP4.95□□□□□ -1.62
LIMA1-205ENST00000550592 SRPRAP08240 638 aaKnown RBP4.95□□□□□ -1.62
LIMA1-205ENST00000550592 CYC1P08574 325 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 PSG1P11464 419 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 SELLP14151 372 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 EIF2DP41214 584 aaKnown RBP4.95□□□□□ -1.62
LIMA1-205ENST00000550592 NR4A2P43354 598 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 PLCD1P51178 756 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 MRPS21P82921 87 aaKnown RBP4.95□□□□□ -1.62
LIMA1-205ENST00000550592 ACSM2AQ08AH3 577 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 HNF4GQ14541 408 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 LRIF1Q5T3J3 769 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 GGNBP1Q5YKI7 109 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 ACSM2BQ68CK6 577 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 SIGIRRQ6IA17 410 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 CLEC17AQ6ZS10 378 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 DPPA4Q7L190 304 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 SHFQ7M4L6 423 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 JAKMIP2Q96AA8 810 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 SRSF8Q9BRL6 282 aaKnown RBP4.95□□□□□ -1.62
LIMA1-205ENST00000550592 TEX12Q9BXU0 123 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 NDST4Q9H3R1 872 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 PLK3Q9H4B4 646 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 SLC28A3Q9HAS3 691 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 PDE7BQ9NP56 450 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 CWC15Q9P013 229 aaKnown RBP4.95□□□□□ -1.62
LIMA1-205ENST00000550592 SEC63Q9UGP8 760 aaKnown RBP4.95□□□□□ -1.62
LIMA1-205ENST00000550592 RCOR1Q9UKL0 485 aa4.95□□□□□ -1.62
LIMA1-205ENST00000550592 IGHV4-28A0A0C4DH34 117 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 C1orf226A1L170 272 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 ASAP2O43150 1006 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 RGS14O43566 566 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 ENTPD3O75355 529 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 ADRB2P07550 413 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 ACTN1P12814 892 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 PON1P27169 355 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 ACADLP28330 430 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 HOXC9P31274 260 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 HNRNPH1P31943 449 aaKnown RBP4.94□□□□□ -1.62
LIMA1-205ENST00000550592 MRPL12P52815 198 aaKnown RBP4.94□□□□□ -1.62
LIMA1-205ENST00000550592 TAS2R40P59535 323 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 MRPS5P82675 430 aaKnown RBP4.94□□□□□ -1.62
LIMA1-205ENST00000550592 MRPS34P82930 218 aaKnown RBP4.94□□□□□ -1.62
LIMA1-205ENST00000550592 ROR2Q01974 943 aaKnown RBP4.94□□□□□ -1.62
LIMA1-205ENST00000550592 PPATQ06203 517 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 GRIK2Q13002 908 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 GPS2Q13227 327 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 PCLAFQ15004 111 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 LEXMQ3ZCV2 418 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 PPP6R3Q5H9R7 873 aaPredicted RBP4.94□□□□□ -1.62
LIMA1-205ENST00000550592 FSCBQ5H9T9 825 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 FNBP1LQ5T0N5 605 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 MFSD4BQ5TF39 518 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 POC5Q8NA72 575 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 MIGA1Q8NAN2 632 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 SAT2Q96F10 170 aaPredicted RBP4.94□□□□□ -1.62
LIMA1-205ENST00000550592 LRFN5Q96NI6 719 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 PCGF1Q9BSM1 259 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 C1QTNF1Q9BXJ1 281 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 C1QTNF7Q9BXJ2 289 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 PAM16Q9Y3D7 125 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 CMAHPQ9Y471 501 aa4.94□□□□□ -1.62
LIMA1-205ENST00000550592 RPRD2Q5VT52 1461 aaKnown RBP4.94□□□□□ -1.62
LIMA1-205ENST00000550592 OR2A25A4D2G3 310 aa4.93□□□□□ -1.62
LIMA1-205ENST00000550592 VCYO14598 125 aa4.93□□□□□ -1.62
LIMA1-205ENST00000550592 TIMM23O14925 209 aa4.93□□□□□ -1.62
LIMA1-205ENST00000550592 TPPPO94811 219 aa4.93□□□□□ -1.62
LIMA1-205ENST00000550592 HIST1H2ABP04908 130 aa4.93□□□□□ -1.62
LIMA1-205ENST00000550592 HIST1H2ADP20671 130 aa4.93□□□□□ -1.62
LIMA1-205ENST00000550592 NNMTP40261 264 aa4.93□□□□□ -1.62
LIMA1-205ENST00000550592 PRCPP42785 496 aa4.93□□□□□ -1.62
LIMA1-205ENST00000550592 NUDT6P53370 316 aa4.93□□□□□ -1.62
LIMA1-205ENST00000550592 MFAP4P55083 255 aa4.93□□□□□ -1.62
LIMA1-205ENST00000550592 PSMC6P62333 389 aa4.93□□□□□ -1.62
LIMA1-205ENST00000550592 IDI1Q13907 227 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms