RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 TAAR2Q9P1P5 351 aa7.6□□□□□ -1.19
NEK3-201ENST00000550331 SUFUQ9UMX1 484 aa7.6□□□□□ -1.19
NEK3-201ENST00000550331 PPIL1Q9Y3C6 166 aa7.6□□□□□ -1.19
NEK3-201ENST00000550331 PCDHGA3Q9Y5H0 932 aa7.6□□□□□ -1.19
NEK3-201ENST00000550331 TEP1Q99973 2627 aaKnown RBP7.6□□□□□ -1.19
NEK3-201ENST00000550331 CREBBPQ92793 2442 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 SCN8AQ9UQD0 1980 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 IGHV5-10-1A0A0J9YXX1 117 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 STMND1H3BQB6 276 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 DDX3XO00571 662 aaKnown RBP eCLIP7.59□□□□□ -1.19
NEK3-201ENST00000550331 FZD6O60353 706 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 ECEL1O95672 775 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 MBD3O95983 291 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 PYGLP06737 847 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 FAM87AP0C7U9 286 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 RARAP10276 462 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 ZNF30P17039 623 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 ITGB6P18564 788 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 AMPD1P23109 780 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 IL1R2P27930 398 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 CD1CP29017 333 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 ALDH4A1P30038 563 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 ADCY8P40145 1251 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 MMP13P45452 471 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 GPR1P46091 355 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 GNPDA1P46926 289 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 LIMK2P53671 638 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 MAPK10P53779 464 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 OR1D5P58170 312 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 CTBSQ01459 385 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 TLE1Q04724 770 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 TYRO3Q06418 890 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 KLHL30Q0D2K2 578 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 SRSF6Q13247 344 aaKnown RBP7.59□□□□□ -1.19
NEK3-201ENST00000550331 BIRC2Q13490 618 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 SQSTM1Q13501 440 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 LRP8Q14114 963 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 PIGHQ14442 188 aaPredicted RBP7.59□□□□□ -1.19
NEK3-201ENST00000550331 SMTNL2Q2TAL5 461 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 AMZ1Q400G9 498 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 E4F1Q66K89 784 aaPredicted RBP7.59□□□□□ -1.19
NEK3-201ENST00000550331 DENND2CQ68D51 928 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 RAET1GQ6H3X3 334 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 SLC30A9Q6PML9 568 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 ADAMTSL4Q6UY14 1074 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 Q6ZVL8 140 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 ZNF765Q7L2R6 523 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 TECPR1Q7Z6L1 1165 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 NLRP8Q86W28 1048 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 ZFAND4Q86XD8 727 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 RAVER1Q8IY67 606 aaKnown RBP7.59□□□□□ -1.19
NEK3-201ENST00000550331 NAGSQ8N159 534 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 TEX26Q8N6G2 289 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 NIPA2Q8N8Q9 360 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 CCDC112Q8NEF3 446 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 OR4D9Q8NGE8 314 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 HSPH1Q92598 858 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 TAAR9Q96RI9 348 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 SEMA3CQ99985 751 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 DPYSL5Q9BPU6 564 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 DDA1Q9BW61 102 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 ZNF395Q9H8N7 513 aaPredicted RBP7.59□□□□□ -1.19
NEK3-201ENST00000550331 ETNK2Q9NVF9 386 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 NOP53Q9NZM5 478 aaKnown RBP7.59□□□□□ -1.19
NEK3-201ENST00000550331 RCOR3Q9P2K3 495 aaPredicted RBP7.59□□□□□ -1.19
NEK3-201ENST00000550331 MYO1AQ9UBC5 1043 aa7.59□□□□□ -1.19
NEK3-201ENST00000550331 ZFC3H1O60293 1989 aaKnown RBP7.59□□□□□ -1.2
NEK3-201ENST00000550331 LRP4O75096 1905 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 UTP20O75691 2785 aaKnown RBP7.58□□□□□ -1.2
NEK3-201ENST00000550331 IGHV1OR21-1A0A087WYE8 117 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 A0A1B0GTH6 734 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 GOLGA6CA6NDK9 693 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 GOLGA6BA6NDN3 693 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 PPFIA2O75334 1257 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 SOD1P00441 154 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 GOLGA6DP0CG33 693 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 THRAP10827 490 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 TCF4P15884 667 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 AK4P27144 223 aaPredicted RBP7.58□□□□□ -1.2
NEK3-201ENST00000550331 ANP32AP39687 249 aaKnown RBP7.58□□□□□ -1.2
NEK3-201ENST00000550331 FASLGP48023 281 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 POLD2P49005 469 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 ATP1A2P50993 1020 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 MAXP61244 160 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 GPLD1P80108 840 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 SLC25A11Q02978 314 aaKnown RBP7.58□□□□□ -1.2
NEK3-201ENST00000550331 C4orf17Q53FE4 359 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 FIGNQ5HY92 759 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 LRRC66Q68CR7 880 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 ALG1LQ6GMV1 187 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 TSPAN33Q86UF1 283 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 VASH2Q86V25 355 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 AGBL5Q8NDL9 886 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 FAM71BQ8TC56 605 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 PIH1D2Q8WWB5 315 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 FATE1Q969F0 183 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 AP2M1Q96CW1 435 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 CCDC74BQ96LY2 380 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 OR2M4Q96R27 311 aa7.58□□□□□ -1.2
NEK3-201ENST00000550331 NUDT22Q9BRQ3 303 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms