RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 A0A0G2JNG1 304 aa13.46□□□□□ -0.25
TROAP-211ENST00000549891 OR5K4A6NMS3 321 aa13.46□□□□□ -0.25
TROAP-211ENST00000549891 A8MU76 341 aa13.46□□□□□ -0.25
TROAP-211ENST00000549891 KIR2DS3K7RE56 304 aa13.46□□□□□ -0.25
TROAP-211ENST00000549891 INPP4BO15327 924 aa13.46□□□□□ -0.25
TROAP-211ENST00000549891 CASRP41180 1078 aa13.46□□□□□ -0.25
TROAP-211ENST00000549891 ZNF165P49910 485 aa13.46□□□□□ -0.25
TROAP-211ENST00000549891 RPL26P61254 145 aaKnown RBP13.46□□□□□ -0.25
TROAP-211ENST00000549891 ABHD18Q0P651 414 aa13.46□□□□□ -0.25
TROAP-211ENST00000549891 CDC20Q12834 499 aa13.46□□□□□ -0.25
TROAP-211ENST00000549891 KIR2DS5Q14953 304 aa13.46□□□□□ -0.25
TROAP-211ENST00000549891 ALG1LQ6GMV1 187 aa13.46□□□□□ -0.25
TROAP-211ENST00000549891 IYDQ6PHW0 289 aa13.46□□□□□ -0.25
TROAP-211ENST00000549891 RFLNAQ6ZTI6 216 aa13.46□□□□□ -0.25
TROAP-211ENST00000549891 NIPA2Q8N8Q9 360 aa13.46□□□□□ -0.25
TROAP-211ENST00000549891 APOBEC4Q8WW27 367 aaKnown RBP13.46□□□□□ -0.25
TROAP-211ENST00000549891 NCSTNQ92542 709 aa13.46□□□□□ -0.25
TROAP-211ENST00000549891 GBP4Q96PP9 640 aa13.46□□□□□ -0.25
TROAP-211ENST00000549891 RIOK2Q9BVS4 552 aaKnown RBP13.46□□□□□ -0.25
TROAP-211ENST00000549891 IP6K2Q9UHH9 426 aa13.46□□□□□ -0.25
TROAP-211ENST00000549891 RPL26L1Q9UNX3 145 aaKnown RBP13.46□□□□□ -0.25
TROAP-211ENST00000549891 TMEM184BQ9Y519 407 aaPredicted RBP13.46□□□□□ -0.25
TROAP-211ENST00000549891 ZNF106Q9H2Y7 1883 aaKnown RBP13.46□□□□□ -0.26
TROAP-211ENST00000549891 A0A0U1RQS6 177 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 GOLGA6L22H0YM25 854 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 DNAJC6O75061 913 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 TCF4P15884 667 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 GARSP41250 739 aaKnown RBP13.45□□□□□ -0.26
TROAP-211ENST00000549891 SRSF1Q07955 248 aaKnown RBP eCLIP13.45□□□□□ -0.26
TROAP-211ENST00000549891 NFATC2Q13469 925 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 SEPT6Q14141 434 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 HADHQ16836 314 aaKnown RBP13.45□□□□□ -0.26
TROAP-211ENST00000549891 CRTC2Q53ET0 693 aaPredicted RBP13.45□□□□□ -0.26
TROAP-211ENST00000549891 LYSMD3Q7Z3D4 306 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 PLXDC1Q8IUK5 500 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 PHYKPLQ8IUZ5 450 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 CCHCR1Q8TD31 782 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 FATE1Q969F0 183 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 LYSMD1Q96S90 227 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 AGAP2Q99490 1192 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 CTRCQ99895 268 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 TDRD1Q9BXT4 1180 aaKnown RBP13.45□□□□□ -0.26
TROAP-211ENST00000549891 SPRY4Q9C004 299 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 EPN3Q9H201 632 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 PKD2L2Q9NZM6 624 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 TBC1D29Q9UFV1 150 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 CHKBQ9Y259 395 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 TTLL3Q9Y4R7 772 aa13.45□□□□□ -0.26
TROAP-211ENST00000549891 C1orf232A0A0U1RR37 186 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 LOC101059948A0A1B0GTJ6 334 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 RGSL1A5PLK6 1076 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 SMTNL1A8MU46 457 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 POLR1CO15160 346 aaPredicted RBP13.44□□□□□ -0.26
TROAP-211ENST00000549891 MATN3O15232 486 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 NKX2-8O15522 239 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 STK17BO94768 372 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 CLDN7O95471 211 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 EML2O95834 649 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 ATP1A1P05023 1023 aaKnown RBP13.44□□□□□ -0.26
TROAP-211ENST00000549891 PRKAR1AP10644 381 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 F3P13726 295 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 CCNCP24863 283 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 SSR1P43307 286 aaKnown RBP13.44□□□□□ -0.26
TROAP-211ENST00000549891 MAPK9P45984 424 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 DSC2Q02487 901 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 SLC25A11Q02978 314 aaKnown RBP13.44□□□□□ -0.26
TROAP-211ENST00000549891 GALNT2Q10471 571 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 MAP7Q14244 749 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 IFI16Q16666 785 aaKnown RBP13.44□□□□□ -0.26
TROAP-211ENST00000549891 SKIDA1Q1XH10 827 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 ANKRD20A8PQ5CZ79 823 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 TXNRD3NBQ6F5E7 133 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.44□□□□□ -0.26
TROAP-211ENST00000549891 ESX1Q8N693 406 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 STARD8Q92502 1023 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 MAML1Q92585 1016 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 FAM83DQ9H4H8 585 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 PCDH9Q9HC56 1237 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 RBM22Q9NW64 420 aaKnown RBP eCLIP13.44□□□□□ -0.265e-9■■■□□ 15
TROAP-211ENST00000549891 ANAPC7Q9UJX3 599 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 PRKAB1Q9Y478 270 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 BZW2Q9Y6E2 419 aaKnown RBP13.44□□□□□ -0.26
TROAP-211ENST00000549891 FLNCQ14315 2725 aa13.44□□□□□ -0.26
TROAP-211ENST00000549891 LILRA5A6NI73 299 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 MYO1FO00160 1098 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 GRID2O43424 1007 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 MFSD11O43934 449 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 SNX2O60749 519 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 ANKRD34CP0C6C1 535 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 SKILP12757 684 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 ACP5P13686 325 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 TCN2P20062 427 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 SPINT3P49223 89 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 FOXK1P85037 733 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 TYRO3Q06418 890 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 UBAP2LQ14157 1087 aaKnown RBP13.43□□□□□ -0.26
TROAP-211ENST00000549891 PAFAH1B3Q15102 231 aaKnown RBP13.43□□□□□ -0.26
TROAP-211ENST00000549891 TDRD12Q587J7 1177 aaKnown RBP13.43□□□□□ -0.26
TROAP-211ENST00000549891 CCDC183Q5T5S1 534 aa13.43□□□□□ -0.26
TROAP-211ENST00000549891 HENMT1Q5T8I9 393 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms