RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 SMYD1Q8NB12 490 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 GIPC3Q8TF64 312 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 NUDT8Q8WV74 236 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 FAM210AQ96ND0 272 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 ATOH8Q96SQ7 321 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 PKMYT1Q99640 499 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 SEZ6LQ9BYH1 1024 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 SMPD3Q9NY59 655 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 GPR45Q9Y5Y3 372 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 COL4A4P53420 1690 aaPredicted RBP14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 CCL15-CCL14A0A0B4J2E2 113 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 HAS3O00219 553 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 CAPGP40121 348 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 AGTR2P50052 363 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 PSMD7P51665 324 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 BNIP3Q12983 259 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 CCL15Q16663 113 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 PLA2G4EQ3MJ16 856 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 PATL1Q86TB9 770 aaKnown RBP14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 ACOX2Q99424 681 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 SLC30A3Q99726 388 aa14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 INTS7Q9NVH2 962 aaKnown RBP14.07□□□□□ -0.16
RAPGEF3-218ENST00000548919 UBA6A0AVT1 1052 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 MATN4O95460 622 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 IDO1P14902 403 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 ELK4P28324 431 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 SLC26A3P40879 764 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 ZFP36L2P47974 494 aaKnown RBP14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 TIGD2Q4W5G0 525 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 Q6ZNX1 250 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 PLEKHH3Q7Z736 793 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 METTL23Q86XA0 190 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 CROCCP3Q8IVE0 287 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 ARRDC2Q8TBH0 407 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 ZNHIT2Q9UHR6 403 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 CPA4Q9UI42 421 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 A0A1W2PP18 115 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 ENPP3O14638 875 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 TNFRSF10BO14763 440 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 GPIP06744 558 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 KCNK10P57789 538 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 OVOS1Q6IE37 1185 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 UGT3A1Q6NUS8 523 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 PAQR3Q6TCH7 311 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 LRRC43Q8N309 656 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 BRI3BPQ8WY22 251 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 MS4A4AQ96JQ5 239 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 RNF145Q96MT1 663 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 FAIMQ9NVQ4 179 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 ANAPC2Q9UJX6 822 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 CDH7Q9ULB5 785 aa14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 MAGED1Q9Y5V3 778 aaPredicted RBP14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 DICER1Q9UPY3 1922 aaKnown RBP14.06□□□□□ -0.16
RAPGEF3-218ENST00000548919 CDC7O00311 574 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 MUSKO15146 869 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 CYBBP04839 570 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 DCKP27707 260 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 LCP2Q13094 533 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 TSNQ15631 228 aaKnown RBP14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 ACBD5Q5T8D3 534 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 TMEM214Q6NUQ4 689 aaKnown RBP14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 CD300LGQ6UXG3 332 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 GALNT7Q86SF2 657 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 RALGPS2Q86X27 583 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 TBC1D15Q8TC07 691 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 BIRC7Q96CA5 298 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 SEMA3CQ99985 751 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 EVLQ9UI08 416 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 RNF112Q9ULX5 631 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 DOCK4Q8N1I0 1966 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 ZNF701M0R085 212 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 TBX18O95935 607 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 C1RP00736 705 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 EEF1B2P24534 225 aaKnown RBP14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 FMO4P31512 558 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 GPR15P49685 360 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 OR4D2P58180 307 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 PLIN5Q00G26 463 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 FSCN1Q16658 493 aaKnown RBP14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 OGFOD2Q6N063 350 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 SPATA2LQ8IUW3 424 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 UMODL1-AS1Q8N2C9 162 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 FBXO39Q8N4B4 442 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 OR2T11Q8NH01 316 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 GTF3C2Q8WUA4 911 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 TANKQ92844 425 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 IGSF8Q969P0 613 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 TRIM54Q9BYV2 358 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 RNF181Q9P0P0 153 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 IFT80Q9P2H3 777 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 GALPQ9UBC7 116 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 ZNF225Q9UK10 706 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 ACTL7AQ9Y615 435 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 MYO16Q9Y6X6 1858 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 PCNAP12004 261 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 IMPDH2P12268 514 aa14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 ZNF182P17025 639 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF3-218ENST00000548919 MATN1P21941 496 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms