RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 PPIL1Q9Y3C6 166 aa16.34■□□□□ 0.21
SSH1-208ENST00000548522 MRPS18BQ9Y676 258 aaKnown RBP16.34■□□□□ 0.21
SSH1-208ENST00000548522 SPTAN1Q13813 2472 aaKnown RBP16.34■□□□□ 0.21
SSH1-208ENST00000548522 LRRC10BA6NIK2 292 aa16.33■□□□□ 0.2
SSH1-208ENST00000548522 DDX3XO00571 662 aaKnown RBP eCLIP16.33■□□□□ 0.2
SSH1-208ENST00000548522 DNAJC6O75061 913 aa16.33■□□□□ 0.2
SSH1-208ENST00000548522 STK17BO94768 372 aa16.33■□□□□ 0.2
SSH1-208ENST00000548522 STC1P52823 247 aa16.33■□□□□ 0.2
SSH1-208ENST00000548522 MC2RQ01718 297 aa16.33■□□□□ 0.2
SSH1-208ENST00000548522 HHEXQ03014 270 aa16.33■□□□□ 0.2
SSH1-208ENST00000548522 UBAP2LQ14157 1087 aaKnown RBP16.33■□□□□ 0.2
SSH1-208ENST00000548522 DEFB109BQ30KR1 87 aa16.33■□□□□ 0.2
SSH1-208ENST00000548522 MARC1Q5VT66 337 aa16.33■□□□□ 0.2
SSH1-208ENST00000548522 ANKRD20A12PQ8NF67 263 aa16.33■□□□□ 0.2
SSH1-208ENST00000548522 STARD8Q92502 1023 aa16.33■□□□□ 0.2
SSH1-208ENST00000548522 NCSTNQ92542 709 aa16.33■□□□□ 0.2
SSH1-208ENST00000548522 DPYSL5Q9BPU6 564 aa16.33■□□□□ 0.2
SSH1-208ENST00000548522 TRIM5Q9C035 493 aa16.33■□□□□ 0.2
SSH1-208ENST00000548522 PCDH18Q9HCL0 1135 aa16.33■□□□□ 0.2
SSH1-208ENST00000548522 PLAAQ9Y263 795 aa16.33■□□□□ 0.2
SSH1-208ENST00000548522 A0A0J9YYE9 177 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 CLEC18AA5D8T8 446 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 A6NCN8 305 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 MFSD11O43934 449 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 ASMTLO95671 621 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 TRBC1P01850 177 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 CCDC172P0C7W6 258 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 RARAP10276 462 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 NR1D1P20393 614 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 NFKBIAP25963 317 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 PCK1P35558 622 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 ARL4AP40617 200 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 ZNF135P52742 658 aaPredicted RBP16.32■□□□□ 0.2
SSH1-208ENST00000548522 CDH6P55285 790 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 DSC2Q02487 901 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 PEX6Q13608 980 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 LRP8Q14114 963 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 ASIC2Q16515 512 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 WDR74Q6RFH5 385 aaPredicted RBP16.32■□□□□ 0.2
SSH1-208ENST00000548522 CLEC18BQ6UXF7 455 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 CHST15Q7LFX5 561 aaPredicted RBP16.32■□□□□ 0.2
SSH1-208ENST00000548522 AOPEPQ8N6M6 819 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 CLEC18CQ8NCF0 446 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 LRRN4Q8WUT4 740 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 ABHD17AQ96GS6 310 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 BTBD6Q96KE9 485 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 CATSPER2Q96P56 530 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 WDR24Q96S15 920 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 TBC1D10AQ9BXI6 508 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 ZNHIT2Q9UHR6 403 aa16.32■□□□□ 0.2
SSH1-208ENST00000548522 CNOT6Q9ULM6 557 aaKnown RBP16.32■□□□□ 0.2
SSH1-208ENST00000548522 FADS2P1A8MWK0 482 aa16.31■□□□□ 0.2
SSH1-208ENST00000548522 K7EM74 188 aa16.31■□□□□ 0.2
SSH1-208ENST00000548522 DLGAP3O95886 979 aa16.31■□□□□ 0.2
SSH1-208ENST00000548522 CD48P09326 243 aa16.31■□□□□ 0.2
SSH1-208ENST00000548522 ACP5P13686 325 aa16.31■□□□□ 0.2
SSH1-208ENST00000548522 CDK11BP21127 795 aaKnown RBP16.31■□□□□ 0.2
SSH1-208ENST00000548522 F8A1P23610 371 aa16.31■□□□□ 0.2
SSH1-208ENST00000548522 GFERP55789 205 aa16.31■□□□□ 0.2
SSH1-208ENST00000548522 ITKQ08881 620 aa16.31■□□□□ 0.2
SSH1-208ENST00000548522 MMRN1Q13201 1228 aa16.31■□□□□ 0.2
SSH1-208ENST00000548522 RALGPS1Q5JS13 557 aa16.31■□□□□ 0.2
SSH1-208ENST00000548522 C16orf46Q6P387 395 aa16.31■□□□□ 0.2
SSH1-208ENST00000548522 ZNF765Q7L2R6 523 aa16.31■□□□□ 0.2
SSH1-208ENST00000548522 BBS5Q8N3I7 341 aa16.31■□□□□ 0.2
SSH1-208ENST00000548522 TEX26Q8N6G2 289 aa16.31■□□□□ 0.2
SSH1-208ENST00000548522 KIAA1143Q96AT1 154 aaPredicted RBP16.31■□□□□ 0.2
SSH1-208ENST00000548522 TEFMQ96QE5 360 aaKnown RBP16.31■□□□□ 0.2
SSH1-208ENST00000548522 SARS2Q9NP81 518 aaKnown RBP16.31■□□□□ 0.2
SSH1-208ENST00000548522 SIDT1Q9NXL6 827 aaKnown RBP16.31■□□□□ 0.2
SSH1-208ENST00000548522 IMPACTQ9P2X3 320 aa16.31■□□□□ 0.2
SSH1-208ENST00000548522 ANAPC2Q9UJX6 822 aa16.31■□□□□ 0.2
SSH1-208ENST00000548522 CHKBQ9Y259 395 aa16.31■□□□□ 0.2
SSH1-208ENST00000548522 TMEM184BQ9Y519 407 aaPredicted RBP16.31■□□□□ 0.2
SSH1-208ENST00000548522 SNX2O60749 519 aa16.3■□□□□ 0.2
SSH1-208ENST00000548522 CLDN7O95471 211 aa16.3■□□□□ 0.2
SSH1-208ENST00000548522 PRLP01236 227 aa16.3■□□□□ 0.2
SSH1-208ENST00000548522 ZNF28P17035 718 aa16.3■□□□□ 0.2
SSH1-208ENST00000548522 MAP4P27816 1152 aaKnown RBP16.3■□□□□ 0.2
SSH1-208ENST00000548522 SLC25A11Q02978 314 aaKnown RBP16.3■□□□□ 0.2
SSH1-208ENST00000548522 FAM182AQ5T1J6 154 aa16.3■□□□□ 0.2
SSH1-208ENST00000548522 PPP1R2P3Q6NXS1 205 aa16.3■□□□□ 0.2
SSH1-208ENST00000548522 IYDQ6PHW0 289 aa16.3■□□□□ 0.2
SSH1-208ENST00000548522 CEACAM20Q6UY09 585 aa16.3■□□□□ 0.2
SSH1-208ENST00000548522 KDELC2Q7Z4H8 507 aa16.3■□□□□ 0.2
SSH1-208ENST00000548522 LURAP1LQ8IV03 231 aa16.3■□□□□ 0.2
SSH1-208ENST00000548522 EXD1Q8NHP7 514 aa16.3■□□□□ 0.2
SSH1-208ENST00000548522 NSMCE1Q8WV22 266 aa16.3■□□□□ 0.2
SSH1-208ENST00000548522 TDRD1Q9BXT4 1180 aaKnown RBP16.3■□□□□ 0.2
SSH1-208ENST00000548522 ARFGAP3Q9NP61 516 aa16.3■□□□□ 0.2
SSH1-208ENST00000548522 MYO6Q9UM54 1294 aa16.3■□□□□ 0.2
SSH1-208ENST00000548522 TTLL3Q9Y4R7 772 aa16.3■□□□□ 0.2
SSH1-208ENST00000548522 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.3■□□□□ 0.2
SSH1-208ENST00000548522 SCINQ9Y6U3 715 aa16.3■□□□□ 0.2
SSH1-208ENST00000548522 PRR19A6NJB7 356 aa16.29■□□□□ 0.2
SSH1-208ENST00000548522 CAPN5O15484 640 aaPredicted RBP16.29■□□□□ 0.2
SSH1-208ENST00000548522 CBFA2T2O43439 604 aa16.29■□□□□ 0.2
SSH1-208ENST00000548522 SKILP12757 684 aa16.29■□□□□ 0.2
SSH1-208ENST00000548522 ZNF30P17039 623 aa16.29■□□□□ 0.2
SSH1-208ENST00000548522 IL4RP24394 825 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms