RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 TMEM135Q86UB9 458 aa17.14■□□□□ 0.33
LETMD1-216ENST00000548401 TRIM74Q86UV6 250 aa17.14■□□□□ 0.33
LETMD1-216ENST00000548401 IGDCC3Q8IVU1 814 aa17.14■□□□□ 0.33
LETMD1-216ENST00000548401 STAMBPL1Q96FJ0 436 aa17.14■□□□□ 0.33
LETMD1-216ENST00000548401 KLHDC7BQ96G42 594 aa17.14■□□□□ 0.33
LETMD1-216ENST00000548401 CDKN2AIPNLQ96HQ2 116 aa17.14■□□□□ 0.33
LETMD1-216ENST00000548401 TBATAQ96M53 351 aa17.14■□□□□ 0.33
LETMD1-216ENST00000548401 RHOXF2Q9BQY4 288 aa17.14■□□□□ 0.33
LETMD1-216ENST00000548401 FAM129AQ9BZQ8 928 aa17.14■□□□□ 0.33
LETMD1-216ENST00000548401 SUDS3Q9H7L9 328 aaPredicted RBP17.14■□□□□ 0.33
LETMD1-216ENST00000548401 FAM114A2Q9NRY5 505 aa17.14■□□□□ 0.33
LETMD1-216ENST00000548401 NCDNQ9UBB6 729 aa17.14■□□□□ 0.33
LETMD1-216ENST00000548401 APPL1Q9UKG1 709 aa17.14■□□□□ 0.33
LETMD1-216ENST00000548401 ANKRD6Q9Y2G4 727 aa17.14■□□□□ 0.33
LETMD1-216ENST00000548401 TEX264Q9Y6I9 313 aa17.14■□□□□ 0.33
LETMD1-216ENST00000548401 TRBV5-4A0A0C4DH59 114 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 SPTY2D1-AS1A0A0U1RR47 76 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 ZCWPW2A0A1B0GU75 182 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 CCDC162PA2VCL2 907 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 OR51F1A6NGY5 319 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 ZNF806P0C7X5 589 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 MC4RP32245 332 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 PDE1CQ14123 709 aaPredicted RBP17.13■□□□□ 0.33
LETMD1-216ENST00000548401 FZD2Q14332 565 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 KIF19Q2TAC6 998 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 KHDC1Q4VXA5 237 aaKnown RBP17.13■□□□□ 0.33
LETMD1-216ENST00000548401 KIAA0930Q6ICG6 404 aaPredicted RBP17.13■□□□□ 0.33
LETMD1-216ENST00000548401 CASC4Q6P4E1 433 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 AFTPHQ6ULP2 937 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 CES3Q6UWW8 571 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 RUBCNQ92622 972 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 GLYATL1Q969I3 302 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 HDAC10Q969S8 669 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 ZNF669Q96BR6 464 aaPredicted RBP17.13■□□□□ 0.33
LETMD1-216ENST00000548401 LRRC39Q96DD0 335 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 SGSM3Q96HU1 749 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 FCRL3Q96P31 734 aaPredicted RBP17.13■□□□□ 0.33
LETMD1-216ENST00000548401 EBNA1BP2Q99848 306 aaKnown RBP17.13■□□□□ 0.33
LETMD1-216ENST00000548401 FGF22Q9HCT0 170 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 RRAGDQ9NQL2 400 aaPredicted RBP17.13■□□□□ 0.33
LETMD1-216ENST00000548401 PHPT1Q9NRX4 125 aaPredicted RBP17.13■□□□□ 0.33
LETMD1-216ENST00000548401 SAMD15Q9P1V8 674 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 PNMA8BQ9ULN7 279 aaPredicted RBP17.13■□□□□ 0.33
LETMD1-216ENST00000548401 SLC6A14Q9UN76 642 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 CHMP2BQ9UQN3 213 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 SNX11Q9Y5W9 270 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 MAD1L1Q9Y6D9 718 aa17.13■□□□□ 0.33
LETMD1-216ENST00000548401 OAS3Q9Y6K5 1087 aaKnown RBP17.13■□□□□ 0.33
LETMD1-216ENST00000548401 LNP1A1A4G5 178 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 TMEM202A6NGA9 273 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 INPP4BO15327 924 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 MAGEC1O60732 1142 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 USP1O94782 785 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 GOT2P00505 430 aaKnown RBP17.12■□□□□ 0.33
LETMD1-216ENST00000548401 PRSS56P0CW18 603 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 PGAM1P18669 254 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 ELK3P41970 407 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 CARSP49589 748 aaKnown RBP17.12■□□□□ 0.33
LETMD1-216ENST00000548401 IRX4P78413 519 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 SPEM2Q0P670 501 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 EIF2B5Q13144 721 aaKnown RBP17.12■□□□□ 0.33
LETMD1-216ENST00000548401 ITGA9Q13797 1035 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 CRYMQ14894 314 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 ANKRD20A4Q4UJ75 823 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 STEAP4Q687X5 459 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 DCP2Q8IU60 420 aaKnown RBP17.12■□□□□ 0.33
LETMD1-216ENST00000548401 PHYKPLQ8IUZ5 450 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 DDHD1Q8NEL9 900 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 BTN2A2Q8WVV5 523 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 HIC2Q96JB3 615 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 WDR92Q96MX6 357 aa17.12■□□□□ 0.33
LETMD1-216ENST00000548401 MAGEB16A2A368 324 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 CACNB4O00305 520 aaPredicted RBP17.11■□□□□ 0.33
LETMD1-216ENST00000548401 KHNYNO15037 678 aaKnown RBP17.11■□□□□ 0.33
LETMD1-216ENST00000548401 EIF3HO15372 352 aaKnown RBP eCLIP17.11■□□□□ 0.33
LETMD1-216ENST00000548401 UGT1A9O60656 530 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 UGT1A6P19224 532 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 ITGALP20701 1170 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 UGT1A1P22309 533 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 UGT1A4P22310 534 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 UGT1A3P35503 534 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 UGT1A5P35504 534 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 ARCN1P48444 511 aaKnown RBP17.11■□□□□ 0.33
LETMD1-216ENST00000548401 CDKN1CP49918 316 aaPredicted RBP17.11■□□□□ 0.33
LETMD1-216ENST00000548401 THOP1P52888 689 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 C21orf59P57076 290 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 PDIA2Q13087 525 aaKnown RBP17.11■□□□□ 0.33
LETMD1-216ENST00000548401 CUL1Q13616 776 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 SF3A2Q15428 464 aaKnown RBP17.11■□□□□ 0.33
LETMD1-216ENST00000548401 CSRP2Q16527 193 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 ALG11Q2TAA5 492 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 GPRC6AQ5T6X5 926 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 PSAPL1Q6NUJ1 521 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 CENPUQ71F23 418 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 SNX20Q7Z614 316 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 PARGQ86W56 976 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 PIANPQ8IYJ0 282 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 DCLK2Q8N568 766 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 ZNF398Q8TD17 642 aa17.11■□□□□ 0.33
LETMD1-216ENST00000548401 CCDC97Q96F63 343 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms