RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 LRRC1Q9BTT6 524 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 CARD6Q9BX69 1037 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 LGR4Q9BXB1 951 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 ASB8Q9H765 288 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 MRM3Q9HC36 420 aaKnown RBP13.67□□□□□ -0.22
PTCH1-213ENST00000546820 TRIM39Q9HCM9 518 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 CHRAC1Q9NRG0 131 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 DNAAF2Q9NVR5 837 aaKnown RBP13.67□□□□□ -0.22
PTCH1-213ENST00000546820 FKBPLQ9UIM3 349 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 MOSPD1Q9UJG1 213 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 OTOGLQ3ZCN5 2332 aa13.67□□□□□ -0.22
PTCH1-213ENST00000546820 CACNA1EQ15878 2313 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 A0A1B0GTQ1 180 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 FADS2P1A8MWK0 482 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 VEGFDO43915 354 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 UGT1A9O60656 530 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 PRAMEF1O95521 474 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 CTSEP14091 401 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 JUNDP17535 347 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 PAMP19021 973 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 UGT1A6P19224 532 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 ITGALP20701 1170 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 SDHBP21912 280 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 UGT1A1P22309 533 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 UGT1A4P22310 534 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 PSMA3P25788 255 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 UGT1A3P35503 534 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 UGT1A5P35504 534 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 PPARGP37231 505 aaPredicted RBP13.66□□□□□ -0.22
PTCH1-213ENST00000546820 RPL21P46778 160 aaKnown RBP13.66□□□□□ -0.22
PTCH1-213ENST00000546820 CCT8P50990 548 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 ARL4CP56559 192 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 SRP54P61011 504 aaKnown RBP13.66□□□□□ -0.22
PTCH1-213ENST00000546820 PRAMEP78395 509 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 EIF2B5Q13144 721 aaKnown RBP13.66□□□□□ -0.22
PTCH1-213ENST00000546820 GPR33Q49SQ1 333 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 ATP13A5Q4VNC0 1218 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 ZRANB3Q5FWF4 1079 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 LDLRAP1Q5SW96 308 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 PRAMEF14Q5SWL7 426 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 KDM7AQ6ZMT4 941 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 ZNF534Q76KX8 674 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 RD3Q7Z3Z2 195 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 SNX20Q7Z614 316 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 CCNJLQ8IV13 435 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 OR6P1Q8NGX9 317 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 HEXDCQ8WVB3 486 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 HDAC10Q969S8 669 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.66□□□□□ -0.22
PTCH1-213ENST00000546820 ULK4Q96C45 1275 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 COX14Q96I36 57 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 TBATAQ96M53 351 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 NAT9Q9BTE0 207 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 KIFC1Q9BW19 673 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 DPH5Q9H2P9 285 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 RMI1Q9H9A7 625 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 UGT1A7Q9HAW7 530 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 UGT1A10Q9HAW8 530 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 UGT1A8Q9HAW9 530 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 TM7SF3Q9NS93 570 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 SYBUQ9NX95 663 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 VPS18Q9P253 973 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 CNOT6Q9ULM6 557 aaKnown RBP13.66□□□□□ -0.22
PTCH1-213ENST00000546820 SOX13Q9UN79 622 aa13.66□□□□□ -0.22
PTCH1-213ENST00000546820 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-213ENST00000546820 CCDC78A2IDD5 438 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 NEMP2A6NFY4 417 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 TMEM202A6NGA9 273 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 C4orf47A7E2U8 309 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 GPR89AB7ZAQ6 455 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 CDX4O14627 284 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-213ENST00000546820 CEACAM5P06731 702 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 GPR89BP0CG08 455 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 RALBP11234 206 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 NME1P15531 152 aaKnown RBP13.65□□□□□ -0.22
PTCH1-213ENST00000546820 MC4RP32245 332 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 MAGEA3P43357 314 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 HK3P52790 923 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 CRADDP78560 199 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 XIAPP98170 497 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 ACVR1Q04771 509 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 CACNG1Q06432 222 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 NFATC2Q13469 925 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 HIF1AQ16665 826 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 UAP1L1Q3KQV9 507 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 ZNF542PQ5EBM4 170 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 STPG1Q5TH74 334 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 LYPLAL1Q5VWZ2 237 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 TAS2R42Q7RTR8 314 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 HID1Q8IV36 788 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 SDR16C5Q8N3Y7 309 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 TSACCQ96A04 125 aaPredicted RBP13.65□□□□□ -0.22
PTCH1-213ENST00000546820 LRRC39Q96DD0 335 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 ZCCHC2Q9C0B9 1178 aaKnown RBP13.65□□□□□ -0.22
PTCH1-213ENST00000546820 L2HGDHQ9H9P8 463 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 CYP4F12Q9HCS2 524 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 SPASTQ9UBP0 616 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 CRLS1Q9UJA2 301 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 SLC17A4Q9Y2C5 497 aa13.65□□□□□ -0.22
PTCH1-213ENST00000546820 TMEM98Q9Y2Y6 226 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms