RNA–Protein interactions for RNA: ENST00000546102.1

CUL3-215, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-215ENST00000546102 TREML2Q5T2D2 321 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 KRT79Q5XKE5 535 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 B3GNTL1Q67FW5 361 aaPredicted RBP3.6□□□□□ -1.83
CUL3-215ENST00000546102 IGFL4Q6B9Z1 124 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 KIAA0930Q6ICG6 404 aaPredicted RBP3.6□□□□□ -1.83
CUL3-215ENST00000546102 ZNF449Q6P9G9 518 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 GJB7Q6PEY0 223 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 SLC2A7Q6PXP3 512 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 LRRC55Q6ZSA7 311 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 MRGPRGQ86SM5 289 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 TADA2BQ86TJ2 420 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 ERO1BQ86YB8 467 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 TICAM1Q8IUC6 712 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 TMEM132CQ8N3T6 1108 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 ENDOVQ8N8Q3 282 aaKnown RBP3.6□□□□□ -1.83
CUL3-215ENST00000546102 SYT2Q8N9I0 419 aaPredicted RBP3.6□□□□□ -1.83
CUL3-215ENST00000546102 TRIML1Q8N9V2 468 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 IL17RCQ8NAC3 791 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 APPL2Q8NEU8 664 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 ERMNQ8TAM6 284 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 C2CD4CQ8TF44 421 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 CCDC47Q96A33 483 aaKnown RBP3.6□□□□□ -1.83
CUL3-215ENST00000546102 NACC2Q96BF6 587 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 DHX58Q96C10 678 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 CTHRC1Q96CG8 243 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 RMDN1Q96DB5 314 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 TRIM44Q96DX7 344 aaPredicted RBP3.6□□□□□ -1.83
CUL3-215ENST00000546102 GBP5Q96PP8 586 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 PRR25Q96S07 402 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 SRSF8Q9BRL6 282 aaKnown RBP3.6□□□□□ -1.83
CUL3-215ENST00000546102 FUCA2Q9BTY2 467 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 HGH1Q9BTY7 390 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 TEX13BQ9BXU2 312 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 GLIS2Q9BZE0 524 aaPredicted RBP3.6□□□□□ -1.83
CUL3-215ENST00000546102 NT5C3AQ9H0P0 336 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 USP29Q9HBJ7 922 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 SLC38A10Q9HBR0 1119 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.6□□□□□ -1.83
CUL3-215ENST00000546102 RMND1Q9NWS8 449 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 MARCH4Q9P2E8 410 aaPredicted RBP3.6□□□□□ -1.83
CUL3-215ENST00000546102 MGAT4CQ9UBM8 478 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 LRWD1Q9UFC0 647 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 FBXO40Q9UH90 709 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 EIF2B4Q9UI10 523 aaKnown RBP3.6□□□□□ -1.83
CUL3-215ENST00000546102 NENFQ9UMX5 172 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 SESN1Q9Y6P5 492 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 PFASO15067 1338 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 PARP14Q460N5 1801 aa3.6□□□□□ -1.83
CUL3-215ENST00000546102 TRGV11A0A075B6L2 103 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 OR2A25A4D2G3 310 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 LRRC53A6NM62 1247 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 C17orf100A8MU93 164 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 GOLGA6L6A8MZA4 724 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 KCNJ18B7U540 433 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 AP4M1O00189 453 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 VWA5AO00534 786 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 CXCL11O14625 94 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 MEIS2O14770 477 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 ATP2A1O14983 1001 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 SLC16A3O15427 465 aaKnown RBP3.59□□□□□ -1.83
CUL3-215ENST00000546102 SLC37A4O43826 429 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 PRAMEF2O60811 474 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 DIAPH2O60879 1101 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 RAMP2O60895 175 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 GOSR1O95249 250 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 TDP2O95551 362 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 PRR35P0CG20 571 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 PKMP14618 531 aaKnown RBP3.59□□□□□ -1.83
CUL3-215ENST00000546102 GSTM2P28161 218 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 HOXA7P31268 230 aaPredicted RBP3.59□□□□□ -1.83
CUL3-215ENST00000546102 HOXA13P31271 388 aaPredicted RBP3.59□□□□□ -1.83
CUL3-215ENST00000546102 HNF4AP41235 474 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 PPP1R2P41236 205 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 CLK3P49761 638 aaKnown RBP3.59□□□□□ -1.83
CUL3-215ENST00000546102 LIG4P49917 911 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 AGTR2P50052 363 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 EFNA5P52803 228 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 RABGGTBP53611 331 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 MFAP4P55083 255 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 SHC2P98077 582 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 GHRHRQ02643 423 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 UBXN1Q04323 297 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 NIPAL4Q0D2K0 466 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 CCDC15Q0P6D6 951 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 FOXL1Q12952 345 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 CSTF3Q12996 717 aaKnown RBP3.59□□□□□ -1.83
CUL3-215ENST00000546102 STIM1Q13586 685 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 PDIA5Q14554 519 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 E2F5Q15329 346 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 CYP1B1Q16678 543 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 ZNF628Q5EBL2 1059 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 SNRNP48Q6IEG0 339 aaKnown RBP3.59□□□□□ -1.83
CUL3-215ENST00000546102 KRT80Q6KB66 452 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 TMEM88Q6PEY1 159 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 TSSK4Q6SA08 328 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 C17orf99Q6UX52 265 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 SERPINA13PQ6UXR4 307 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 SLC39A5Q6ZMH5 540 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 NIPA1Q7RTP0 329 aa3.59□□□□□ -1.83
CUL3-215ENST00000546102 GALNT7Q86SF2 657 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms